Gene
| Gene Model ID | pfu_aug1.0_123.1_50648 |
|---|---|
| Locus | scaffold123.1 : 1 ... 12935 : - |
| To GenomeBrowser | scaffold123.1:1..12935 |
| Genes list of scaffold | scaffold123.1 |
| Synonym | pfu_aug2.0_744.1_14517 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_123.1_50648.t1 | 1 | 1 | Homeobox | 72 | 128 | 1.0e-22 | 79.5 | 1.0e-26 | 1.5e-22 | 78.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_123.1_50648.t1 | gi|22859614|emb|CAD45551.1| | goosecoid protein [Patella vulgata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_123.1_50648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_123.1_50648.t1 atgttggcggctgcagcggcggctagtggcacccactctgtcttctctatagataacatcctggcaccacgtccgtttct tgcccacagaccagcgccttatttcccttacccagcactcgcacatgcaccgcaagatatatttgctccatacagcccat ttccagggttgatgacggcagcggatcttgcacgcgcaggccagaaacggaagcgacgtcatcgtacgatcttcaccgaa gaacaattagaggaattggaagcaacttttcagaagactcactatccagatgtactgttacgagaagaacttgctatgaa gatagatttgaaggaagagagagttgaggtctggttcaaaaatcgtagagcgaaatggaggaaagtcaaaagagaagaag aagcagcgaaaaggtcatcgtctgatatgactccaacaaagcctctttctgagtgtaaagataaaggacagatatcaaac acagacgtacaatgtggacagacagacgtatcgttagaccagaatgtggactctgaccttagtgattgtcacagtgaaag aagtacagactcgcccaaaattgacatagaggaaaatgaagacagtgtaagtgacctacagggtgtaacagttccatttc ctacatcgctacaaaattctagtgcttcttcagacgaaattgcgtcatga |
|
Protein
| Protein ID | pfu_aug1.0_123.1_50648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_123.1_50648.t1 MLAAAAAASGTHSVFSIDNILAPRPFLAHRPAPYFPYPALAHAPQDIFAPYSPFPGLMTAADLARAGQKRKRRHRTIFTE EQLEELEATFQKTHYPDVLLREELAMKIDLKEERVEVWFKNRRAKWRKVKREEEAAKRSSSDMTPTKPLSECKDKGQISN TDVQCGQTDVSLDQNVDSDLSDCHSERSTDSPKIDIEENEDSVSDLQGVTVPFPTSLQNSSASSDEIAS |
|