Gene
| Gene Model ID | pfu_aug1.0_1231.1_58409 |
|---|---|
| Locus | scaffold1231.1 : 25616 ... 37845 : + |
| To GenomeBrowser | scaffold1231.1:25616..37845 |
| Genes list of scaffold | scaffold1231.1 |
| Synonym | pfu_aug2.0_773.1_11173 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1231.1_58409.t1 | 1 | 1 | An_peroxidase | 74 | 172 | 2.4e-21 | 75.7 | 1.4e-24 | 3.4e-21 | 75.2 |
| pfu_aug1.0_1231.1_58409.t1 | 2 | 1 | EF-hand_8 | 213 | 259 | 4.6e-08 | 32.5 | 6.6e-09 | 1.6e-05 | 24.3 |
| pfu_aug1.0_1231.1_58409.t1 | 3 | 1 | EF-hand_6 | 215 | 226 | 5.8e-09 | 35.0 | 0.8 | 2000.0 | -0.8 |
| pfu_aug1.0_1231.1_58409.t1 | 2 | 1 | EF-hand_7 | 233 | 258 | 1.3e-08 | 34.8 | 1.9e-07 | 0.00046 | 20.2 |
| pfu_aug1.0_1231.1_58409.t1 | 2 | 1 | EF-hand_1 | 234 | 258 | 2.7e-10 | 38.7 | 7.6e-10 | 1.9e-06 | 26.7 |
| pfu_aug1.0_1231.1_58409.t1 | 3 | 2 | EF-hand_6 | 235 | 258 | 5.8e-09 | 35.0 | 1.9e-07 | 0.00047 | 19.8 |
| pfu_aug1.0_1231.1_58409.t1 | 2 | 2 | EF-hand_1 | 273 | 297 | 2.7e-10 | 38.7 | 2.1e-05 | 0.051 | 12.8 |
| pfu_aug1.0_1231.1_58409.t1 | 3 | 3 | EF-hand_6 | 273 | 295 | 5.8e-09 | 35.0 | 7.9e-06 | 0.02 | 14.7 |
| pfu_aug1.0_1231.1_58409.t1 | 2 | 2 | EF-hand_7 | 273 | 319 | 1.3e-08 | 34.8 | 8.4e-06 | 0.021 | 14.9 |
| pfu_aug1.0_1231.1_58409.t1 | 2 | 2 | EF-hand_8 | 282 | 318 | 4.6e-08 | 32.5 | 7.4e-05 | 0.18 | 11.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1231.1_58409.t1 | gi|345479933|ref|XP_001607612.2| | 6.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_1231.1_58409.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1231.1_58409.t1 atggcgctttctataaagacaaaacgtcagtcagtgcatgaattttataaattgtcttcattgtcgtgcttaaacatcga cggcggctttcggaaaacgacaaaaattcgcaggcgttcacattttcttcgactagaaagagtgtgtcatgcatttgccg actcgcattttcctttttactgccgcacgtgcaaatctggcttagccgccctactggcaatagcaaaactgagggcgctc tatgacaacagaaatgaatccatagacgacatagacttattcacaggtgggctgctagagactactttaaacggacctgg gccgctgtttcagagaatcctgcttgatcagtttatgagattgaggcatggtgacagattttggtttgaaaacacagatt cgagatttcgccagtttaatgacagcgacattgaggacatcagacaagtaacgttgaaggatatcattacaaaggtcaca gaaatcgatcccaacgatttacccgatgacatctttattcataataatgttatgataatgttaacatctgaatttcggat actttactctggcgaggataaagtcttcgatggtggtttaaagccttttgttcgccaagaacagctcatgttgcagaaaa tgagtctgactcggtacgaatttgccgatattcttggactgaaggcggactcggctttcattgatcacatgttcaaactt gtcgacaaagatggtaatggcttcattggattccaagaattcatggatttcttctttctgatgtcagaaggtgatgctga caagaaagcctctctaatctttaacatgtatgacaatggaaacaaaggctatttgacgaagaaagacttctcttcgatga tcatgtcattaatggatttgtcagatacaagtaattcgttaacagagaaagaacggtcagaaatgatagataccatatat ggaagtgtagggttaaaggttaaaaagggcatggacttaaggacgttcaaagatattttcctcaacaaagactacgccca agttctcgatcaagccacgcttcctatagaaggaattaagcccgatgtggaagaacatccaatttatatagacagagagg tcacatttcacgctgaaagagtccctcctcaagagaccccggtgtccagacagaggcgaccaagtgctgccgttatctat acaaaaagtcgaaacaaaattcaacagaggatttctacaggcatgtataacgacgatatacatgccgcaaaccgactcac ttga |
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Protein
| Protein ID | pfu_aug1.0_1231.1_58409.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1231.1_58409.t1 MALSIKTKRQSVHEFYKLSSLSCLNIDGGFRKTTKIRRRSHFLRLERVCHAFADSHFPFYCRTCKSGLAALLAIAKLRAL YDNRNESIDDIDLFTGGLLETTLNGPGPLFQRILLDQFMRLRHGDRFWFENTDSRFRQFNDSDIEDIRQVTLKDIITKVT EIDPNDLPDDIFIHNNVMIMLTSEFRILYSGEDKVFDGGLKPFVRQEQLMLQKMSLTRYEFADILGLKADSAFIDHMFKL VDKDGNGFIGFQEFMDFFFLMSEGDADKKASLIFNMYDNGNKGYLTKKDFSSMIMSLMDLSDTSNSLTEKERSEMIDTIY GSVGLKVKKGMDLRTFKDIFLNKDYAQVLDQATLPIEGIKPDVEEHPIYIDREVTFHAERVPPQETPVSRQRRPSAAVIY TKSRNKIQQRISTGMYNDDIHAANRLT |
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