Gene
| Gene Model ID | pfu_aug1.0_12319.1_25016 |
|---|---|
| Locus | scaffold12319.1 : 1 ... 9441 : + |
| To GenomeBrowser | scaffold12319.1:1..9441 |
| Genes list of scaffold | scaffold12319.1 |
| Synonym | pfu_aug2.0_139.1_30280 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12319.1_25016.t1 | 1 | 1 | Clathrin_H_link | 176 | 241 | 3.4e-20 | 71.6 | 2.8e-23 | 1.1e-19 | 70.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12319.1_25016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12319.1_25016.t1 attatagagcatgtttctgcctataaacctttgctgacctccatcaagaaggagtatgaagacaccatagaggccataca gaaagggcttacattagaagaggccacagacttgaaccttctatataaaaacctggatgtcctagacagacagttaaaag aactcaacataagtttacgtacacggtatctgccaaagtcacagaaggtggacctcaaggacaaactggacaacaaggtc gattatcgcgaccagcttgtcagacaaggacagctctacagagctaaacgatatcgtctgaagatagcggtagaggctgc ccaggcttataacagagtaaaaccaccacatcaaacagtgggtgatgctgtgacgtttgctttggctcaggcttctggca tgcaagtccaggaaaaagaaccaggacaagaacaaggtcagcaggatggtcagcagagggagggatccccatctggacct cacacaaccacatcatttgacgatgatgatccgaacaaggagaaagaggccgagatgatgttagagtacatagagaaatt caacgaattgtttgaagatgggaaatatgaagatgccgctattcacgctgctaacagtccgaagggaatcttacgtactt ctgctactctggccaaattcagagatgtattggtacctgtgagacgtcagaagtcccccctcctctctttctgtgaggct gtcatggcctctgtgggagcggtggggaccaaacctaacaaagagctgtctgaagaatgtatacagtgtgctcttaacga gaacaggactgatctactttctcattggatatctcaggacaggttatccctgaccaagaacacaggagacttgatcagta agcattgccggtgtaaagttccatgtaaatgtggatgccaggcactagcccagaatatatacgccaagttacatctacat aatgatgctgtggtatgcctgctcaaacaggggagagtatatgctggcttggagtacgcaaagaataaagctccattttc caaggaaacatacatggaggtattacgtacatgcccgtccttacagttaatgcaggcgttagcggcagaggatgacagtg gtgtacgaccactaccgatcggtactattatactagtgctgctagaaaataaccagtttgagctagtgcttcagtttata caagaactacaaaatactccatctgcagataggtaa |
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Protein
| Protein ID | pfu_aug1.0_12319.1_25016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12319.1_25016.t1 IIEHVSAYKPLLTSIKKEYEDTIEAIQKGLTLEEATDLNLLYKNLDVLDRQLKELNISLRTRYLPKSQKVDLKDKLDNKV DYRDQLVRQGQLYRAKRYRLKIAVEAAQAYNRVKPPHQTVGDAVTFALAQASGMQVQEKEPGQEQGQQDGQQREGSPSGP HTTTSFDDDDPNKEKEAEMMLEYIEKFNELFEDGKYEDAAIHAANSPKGILRTSATLAKFRDVLVPVRRQKSPLLSFCEA VMASVGAVGTKPNKELSEECIQCALNENRTDLLSHWISQDRLSLTKNTGDLISKHCRCKVPCKCGCQALAQNIYAKLHLH NDAVVCLLKQGRVYAGLEYAKNKAPFSKETYMEVLRTCPSLQLMQALAAEDDSGVRPLPIGTIILVLLENNQFELVLQFI QELQNTPSADR |
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