Gene
| Gene Model ID | pfu_aug1.0_12319.1_25017 |
|---|---|
| Locus | scaffold12319.1 : 9747 ... 21605 : - |
| To GenomeBrowser | scaffold12319.1:9747..21605 |
| Genes list of scaffold | scaffold12319.1 |
| Synonym | pfu_aug2.0_652.1_07759 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12319.1_25017.t2 | 1 | 1 | Ras | 14 | 196 | 7.4e-34 | 116.4 | 5.5e-37 | 1.4e-33 | 115.6 |
| pfu_aug1.0_12319.1_25017.t2 | 1 | 1 | Miro | 14 | 140 | 3.1e-11 | 43.8 | 2.3e-14 | 5.8e-11 | 42.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12319.1_25017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12319.1_25017.t1 atgagcgatgattcgggcgatgacaagccgagaaagatcaaagttacggcggtgggggacagcggagtgggcaagacgtg catgctgatgacgtacgtcaacaaccagtaccccaaggaggggagggtaccgtcactgtatgagaacaacaccgtcaaag ccggaagaagtgaatcgtttgaagtaccgattaacatagaagtggacagtgtcagctatgtactaggattaactgacacg ataggcgaggacgagtatagacgtttacgagaactattcactgcgggaacggaagtgtttctcgtctgcttcagtgtaac ggaaccagatacattagaaaatgtaaagaagaactggctcacggaaatcaaaattctgtctcccaaaggaaaatttattc ttgtcggaacaaaaatcgataggagggacgatcaagatattctgaaacagttaaaagaacaaaacaaaaaagtcataaca acgctagatggtgtgaaaatagcaaattctgttggtgccaaggcttatgtagagtgttcggctatagagcaaataggact taaacaagtgttcgaaactgttgtcatggttgcaaccggaaatgctgaaggccccaaaaaaccaaacggttcaaaacctc aatgttccgtctcatga |
|
| Transcript ID | pfu_aug1.0_12319.1_25017.t2 |
| Definition | - |
>pfu_aug1.0_12319.1_25017.t2 atgagcgatgattcgggcgatgacaagccgagaaagatcaaagttacggcggtgggggacagcggagtgggcaagacgtg catgctgatgacgtacgtcaacaaccagtaccccaaggaggggagggtaccgtcactgtatgagaacaacaccgtcaaag ccggaagaagtgaatcgtttgaagtaccgattaacatagaagtggacagtgtcagctatgtactaggattaactgacacg ataggcgaggacgagtatagacgtttacgagaactattcactgcgggaacggaagtgtttctcgtctgcttcagtgtaac ggaaccagatacattagaaaatgtaaagaagaactggctcacggaaatcaaaattctgtctcccaaaggaaaatttattc ttgtcggaacaaaaatcgataggagggacgatcaagatattctgaaacagttaaaagaacaaaacaaaaaagtcataaca acgctagatggtgtgaaaatagcaaattctgttggtgccaaggcttatgtagagtgttcggctatagagcaaataggact taaacaagtgttcgaaactgttgtcatggttgcaaccggaaatgctgaaggccccaaaaaaccaaacggttcaaaacctc aatgttccgtctcatga |
|
Protein
| Protein ID | pfu_aug1.0_12319.1_25017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12319.1_25017.t1 MSDDSGDDKPRKIKVTAVGDSGVGKTCMLMTYVNNQYPKEGRVPSLYENNTVKAGRSESFEVPINIEVDSVSYVLGLTDT IGEDEYRRLRELFTAGTEVFLVCFSVTEPDTLENVKKNWLTEIKILSPKGKFILVGTKIDRRDDQDILKQLKEQNKKVIT TLDGVKIANSVGAKAYVECSAIEQIGLKQVFETVVMVATGNAEGPKKPNGSKPQCSVS |
|
| Protein ID | pfu_aug1.0_12319.1_25017.t2 |
| Definition | - |
>pfu_aug1.0_12319.1_25017.t2 MSDDSGDDKPRKIKVTAVGDSGVGKTCMLMTYVNNQYPKEGRVPSLYENNTVKAGRSESFEVPINIEVDSVSYVLGLTDT IGEDEYRRLRELFTAGTEVFLVCFSVTEPDTLENVKKNWLTEIKILSPKGKFILVGTKIDRRDDQDILKQLKEQNKKVIT TLDGVKIANSVGAKAYVECSAIEQIGLKQVFETVVMVATGNAEGPKKPNGSKPQCSVS |
|