Gene
| Gene Model ID | pfu_aug1.0_1233.1_00661 |
|---|---|
| Locus | scaffold1233.1 : 25393 ... 45975 : - |
| To GenomeBrowser | scaffold1233.1:25393..45975 |
| Genes list of scaffold | scaffold1233.1 |
| Synonym | pfu_aug2.0_604.1_14379 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1233.1_00661.t1 | 8 | 1 | Laminin_EGF | 5 | 62 | 0.0 | 218.5 | 1.2e-15 | 1.8e-11 | 43.8 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 2 | Laminin_EGF | 65 | 113 | 0.0 | 218.5 | 1.3e-14 | 1.9e-10 | 40.4 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 3 | Laminin_EGF | 116 | 154 | 0.0 | 218.5 | 4.8e-13 | 7.2e-09 | 35.4 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 4 | Laminin_EGF | 283 | 328 | 0.0 | 218.5 | 3.5e-16 | 5.1e-12 | 45.5 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 5 | Laminin_EGF | 331 | 373 | 0.0 | 218.5 | 4.9e-14 | 7.3e-10 | 38.6 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 6 | Laminin_EGF | 377 | 417 | 0.0 | 218.5 | 3.9e-13 | 5.8e-09 | 35.7 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 7 | Laminin_EGF | 427 | 460 | 0.0 | 218.5 | 0.022 | 330.0 | 1.2 |
| pfu_aug1.0_1233.1_00661.t1 | 8 | 8 | Laminin_EGF | 463 | 497 | 0.0 | 218.5 | 5.6e-09 | 8.3e-05 | 22.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1233.1_00661.t1 | gi|291244980|ref|XP_002742373.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1233.1_00661.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1233.1_00661.t1 atgtttgtagcctgtgattgtgacccgagtggatcgttgaagaaaggtcagtgtgatgaccacacagatgaagcatatgg actcgttgccggtagatgtcactgtaaacgatttgtcgagggaaaacgctgcgatagatgtaaggatggttactggaact tggacgagaataatccagacggctgtgaaccttgtgattgtaacattctgggtaccatagccaatgctggatgtgacaaa cagactggcatgtgtctgtgtaaacgttatgtcacaggacagaggtgtgaccagtgttatcctggattctggggtttggg agaggagctgacaggttgccggccatgtgactgtgatgtaggagggtcagtatcagaggaatgtgacgtcaatgacggca ggtgtacgtgtaaacctaacataatcggcagacagtgtgacgcccctcgaccagagtactactttgccaaactggattat cttctatatgaagctgagttagccaaaggatatgggatgccagatatatgggaggatgtacgtgtgtatgttaacaggga ccaacaaccagaccagaatggaccgtgtgccaaccatagaccatctgatgatgaaaagactgccgtcatggcacctggtt cccggtttaccgagattgtgctggtgccatccacagacagcattccaatcttccaaggtatcggctatcccgattacatg aggaacgaattcatccgttatagatgtcgtgaatcacagctttcagtataccagccaagtttggtggatttctgccgtaa actgaccttcagtatctcctcaagcatgatgcacagagctctaccatgtgagtgtgatccaactggatccctaagctcgg agtgtgaaccggccgggggtcagtgtcagtgtaaacctaatgtctacggtagacgctgtgataggtgtgtacctggaaca tacaactttggacctgagggatgcaaaccttgtaactgccatgagtatggagcacgggacaatttctgtgatgctgtaac ggggcaatgtcagtgtataaataatgtagccagtcgtacgtgtgagcgatgtgcagacggttactatggattccctcaat gtagaccatgtaactgtaacggaaacgctgacgtgtgcgaagatctgactggacgatgtattggttgccgtgacaacaca gctggggattattgtgagaggtgttcagcaggttactatggggacccccgtatcaacgtgagaattccatgtgaaccatg tatgtgtcctggaggaccagacagtcctattcagcatgcagatagctgtgctgttgacccgaggtcaaatactgtgacat gtgaatgtaaccttggttaccaagagtgtatatgttttgattacggtacagaccagagtgcagggcattgtaacagggag aatggccaatgtaactgcctgcccaatgtagtagggactcgctgtgagagattgatggtcagtgtgattgtatacgatat ggtaatggtgagccagcccgagggggcagggactgtgcatcgtgtcctgatctgttctggggagatcctacggtacaatg tattgattgcagaggaggtactgagcatgaggatttccttgacacctgagcagattatagaacttgctgacgaaatcaac aagacgatcagtggtctacaaaacatagatgacatcataacggctacgagtgatgacttgtcacgggcacagaaactgaa agagagggcagagaaggcagaagctgaagctatgagcaatctaaagagagcagatggtgtattgaataacctaaaggatg ctacaacagcccaggacgatgctcagagagctatagaccaagctgatacagagattgctgatgctgagcaagatcttgta cagattgagtcagagacggcagctgctggagataaaacacaacagtccaggaaggttctagagattctacggataaaact tggggaactcaggtcacaatactttgaaaatgagagaaacgttagaaatgcagagatagccgcagaagaagccgaaagac ttgccaatatttcacaagagaaagctaatgaactcacaactaaatattcagcaacatcaactgagcttgattcccgatac aatatgaccagtcaggcacaggcacgtgccaaagctctcaaggaaagagccgacaaaatcgccatagaaaccactgcaaa acttaaaaattaa |
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Protein
| Protein ID | pfu_aug1.0_1233.1_00661.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1233.1_00661.t1 MFVACDCDPSGSLKKGQCDDHTDEAYGLVAGRCHCKRFVEGKRCDRCKDGYWNLDENNPDGCEPCDCNILGTIANAGCDK QTGMCLCKRYVTGQRCDQCYPGFWGLGEELTGCRPCDCDVGGSVSEECDVNDGRCTCKPNIIGRQCDAPRPEYYFAKLDY LLYEAELAKGYGMPDIWEDVRVYVNRDQQPDQNGPCANHRPSDDEKTAVMAPGSRFTEIVLVPSTDSIPIFQGIGYPDYM RNEFIRYRCRESQLSVYQPSLVDFCRKLTFSISSSMMHRALPCECDPTGSLSSECEPAGGQCQCKPNVYGRRCDRCVPGT YNFGPEGCKPCNCHEYGARDNFCDAVTGQCQCINNVASRTCERCADGYYGFPQCRPCNCNGNADVCEDLTGRCIGCRDNT AGDYCERCSAGYYGDPRINVRIPCEPCMCPGGPDSPIQHADSCAVDPRSNTVTCECNLGYQECICFDYGTDQSAGHCNRE NGQCNCLPNVVGTRCERLMVSVIVYDMVMVSQPEGAGTVHRVLICSGEILRYNVLIAEEVLSMRISLTPEQIIELADEIN KTISGLQNIDDIITATSDDLSRAQKLKERAEKAEAEAMSNLKRADGVLNNLKDATTAQDDAQRAIDQADTEIADAEQDLV QIESETAAAGDKTQQSRKVLEILRIKLGELRSQYFENERNVRNAEIAAEEAERLANISQEKANELTTKYSATSTELDSRY NMTSQAQARAKALKERADKIAIETTAKLKN |
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