Gene
| Gene Model ID | pfu_aug1.0_12347.1_39315 |
|---|---|
| Locus | scaffold12347.1 : 3926 ... 13977 : + |
| To GenomeBrowser | scaffold12347.1:3926..13977 |
| Genes list of scaffold | scaffold12347.1 |
| Synonym | pfu_aug2.0_209.1_30420 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12347.1_39315.t1 | 1 | 1 | CTP_transf_2 | 104 | 164 | 7.7e-08 | 32.5 | 9.1e-12 | 1.4e-07 | 31.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12347.1_39315.t1 | gi|241802326|ref|XP_002414532.1| | glycerol-3-phosphate cytidylyltransferase, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12347.1_39315.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12347.1_39315.t1 atgtcaccgacagtacagtttgcagttttgacatggttcattttggacatgcaaatgcaattagacagggagtgtaaaag aacagctggtgtatctaccacagacttggtcggtagaatgttattagtcaccaagactcatcatcagagggacgacccac aagtagataaaactaacgtaggcgaaataggaagtaatcaggcagcagcgagtccatggacgggtgtgtcacaattctta ccaacctccaacaaaatcatccagtttgccgagggtagagatcccctacctggagacaggatcgtctacgtcacgggagc gtttgatatgtttcatgttgggttgttagatttcttagaaaaggccaagcaggaaggagattttgtaattgttggtcttc actcagactcagaggttaatagatataaagggtccaatttccccattatgaatctacatgaaagagttcttagtgtttta gcctgcaagcagatttatgacgtcacagttagaaataacgtcaaaagcagtcatgtcggcttttctagcagtccataa |
|
Protein
| Protein ID | pfu_aug1.0_12347.1_39315.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12347.1_39315.t1 MSPTVQFAVLTWFILDMQMQLDRECKRTAGVSTTDLVGRMLLVTKTHHQRDDPQVDKTNVGEIGSNQAAASPWTGVSQFL PTSNKIIQFAEGRDPLPGDRIVYVTGAFDMFHVGLLDFLEKAKQEGDFVIVGLHSDSEVNRYKGSNFPIMNLHERVLSVL ACKQIYDVTVRNNVKSSHVGFSSSP |
|