Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12367.1_53809
Locus scaffold12367.1 : 20325 ... 28015 : -
To GenomeBrowser scaffold12367.1:20325..28015
Genes list of scaffold scaffold12367.1
Synonym pfu_aug2.0_42.1_06816

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_12367.1_53809.t1 1 1 Arfaptin 17 231 0.0 234.0 0.0 0.0 233.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_12367.1_53809.t1 gi|332027571|gb|EGI67644.1| Arfaptin-2 [Acromyrmex echinatior] 0.0

Transcript
Transcript IDpfu_aug1.0_12367.1_53809.t1
Definition-
>pfu_aug1.0_12367.1_53809.t1
atggcagcagcacacactaaactagaatctctgaaacactggagtgtcagcacattcaaatgcaccaaacagtatctgtc
agagagacttggaaaaggatctaaaactgtagacttagaactagagacccagatagaatcacttcgagacatgcagcgta
aatactccaacattctgaggctagcacgctctttgaccaaccattttttccaagttgtacaaacacagcgagctctaggg
gaagctttctcagagcaagcacagaggagcccggagcttcaggaagaattttcttataactgtgaaacacagagagctct
tgtcaaaaacggagaaattcttttaggtgccatgaactttttcacatctacagtcaacacgctgtgcaacaaaaccatgg
aggataccttgttaacaatccgtaattatgaggcagcaaggttagagtatgatgcgtacaggaatgacgtagatatgtta
cagctagctcagcgagattccactactgtggccaagacagaagaggctaagcgcaagtttgaagctcataaagtcaagtt
tgacaagctgagaggtgatgtccaagtcaaattgaagttccttgatgaaaatagggttaaggtcatgcataagcagctcc
tgctctttcacaacgctgtgtcggcatatttctctggaaacgatgcagcattagaagccactctgaagcagttcaacatc
aaacttaaagctccaaacaccgataaaccatcatggctagaacagtaa

Protein
Protein IDpfu_aug1.0_12367.1_53809.t1
Definition-
>pfu_aug1.0_12367.1_53809.t1
MAAAHTKLESLKHWSVSTFKCTKQYLSERLGKGSKTVDLELETQIESLRDMQRKYSNILRLARSLTNHFFQVVQTQRALG
EAFSEQAQRSPELQEEFSYNCETQRALVKNGEILLGAMNFFTSTVNTLCNKTMEDTLLTIRNYEAARLEYDAYRNDVDML
QLAQRDSTTVAKTEEAKRKFEAHKVKFDKLRGDVQVKLKFLDENRVKVMHKQLLLFHNAVSAYFSGNDAALEATLKQFNI
KLKAPNTDKPSWLEQ

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495