Gene
| Gene Model ID | pfu_aug1.0_12372.1_39321 |
|---|---|
| Locus | scaffold12372.1 : 4966 ... 20667 : + |
| To GenomeBrowser | scaffold12372.1:4966..20667 |
| Genes list of scaffold | scaffold12372.1 |
| Synonym | pfu_aug2.0_211.1_03804 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12372.1_39321.t1 | 3 | 1 | Aconitase | 25 | 70 | 1.9e-10 | 39.8 | 1.0e-09 | 7.5e-06 | 24.6 |
| pfu_aug1.0_12372.1_39321.t1 | 3 | 2 | Aconitase | 70 | 101 | 1.9e-10 | 39.8 | 2.2e-06 | 0.016 | 13.6 |
| pfu_aug1.0_12372.1_39321.t1 | 1 | 1 | Aconitase_C | 170 | 239 | 8.3e-14 | 51.8 | 1.7e-17 | 1.3e-13 | 51.2 |
| pfu_aug1.0_12372.1_39321.t1 | 3 | 3 | Aconitase | 237 | 271 | 1.9e-10 | 39.8 | 0.25 | 1900.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12372.1_39321.t1 | gi|349802363|gb|AEQ16654.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12372.1_39321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12372.1_39321.t1 atggaaaatgatcgagctccacgaaagttgaacagacctatgaccctctctgaaaaaattctttatggtcacattgatga tccaaaatctcagatggcaatgttacagtttatatccagtggcttacccagggtggctgtaccttccactattcactgtg accacttgattgctgctgagactggtggaaaggaagatttagctagagcaaagctggaaccccacgtaaatggccctttc actccagatctggctcatccaatctcaaagttaggacagacagctaaggaaaaggactggccattggaaatcaaagttgg atcaaaatttaagttagatagcccttacggtgacgagcttccagctaaaggatttgatcccggacaggatacctaccaac ctcctcctggtgatggatcaagtctcaatgtgaacgtagacccagaaagtacaagactacaacttctgtcaccattcgcc aaatggaatggcaaggatctagaagatatggtagtcttgatcaaggtgaaaggaaaatgcactacagatcatatcagtgc tgctggaccatggttaaaatacagaggtcacctcgataacatctctaataatctactcattaccgctataaatattgaaa acgaggaaatgaataaagtaaagaatcaattaactggtgaatattcagaggtaccaaaagtggccagggcatacaagccg gtgacgtgtaaaataaagcatcaagatggatctgaagaaacaataaaattgaatcatacgatgaatgaaggacaaataga atggttccaagctggtagtgctctgaacagaatgaaggagttacagagatag |
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Protein
| Protein ID | pfu_aug1.0_12372.1_39321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12372.1_39321.t1 MENDRAPRKLNRPMTLSEKILYGHIDDPKSQMAMLQFISSGLPRVAVPSTIHCDHLIAAETGGKEDLARAKLEPHVNGPF TPDLAHPISKLGQTAKEKDWPLEIKVGSKFKLDSPYGDELPAKGFDPGQDTYQPPPGDGSSLNVNVDPESTRLQLLSPFA KWNGKDLEDMVVLIKVKGKCTTDHISAAGPWLKYRGHLDNISNNLLITAINIENEEMNKVKNQLTGEYSEVPKVARAYKP VTCKIKHQDGSEETIKLNHTMNEGQIEWFQAGSALNRMKELQR |
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