Gene
| Gene Model ID | pfu_aug1.0_12382.1_39323 |
|---|---|
| Locus | scaffold12382.1 : 6052 ... 19375 : - |
| To GenomeBrowser | scaffold12382.1:6052..19375 |
| Genes list of scaffold | scaffold12382.1 |
| Synonym | pfu_aug2.0_3183.1_12400 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_23 | 60 | 195 | 5.7e-17 | 61.9 | 1.5e-19 | 8.2e-17 | 61.3 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_4 | 72 | 142 | 1.3e-06 | 27.6 | 1.1e-08 | 6.2e-06 | 25.4 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | MTS | 78 | 183 | 3.6e-12 | 45.9 | 9.9e-15 | 5.4e-12 | 45.4 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_31 | 79 | 192 | 3.2e-25 | 88.4 | 8.2e-28 | 4.5e-25 | 88.0 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Ubie_methyltran | 79 | 184 | 3.5e-11 | 42.6 | 9.1e-14 | 5.0e-11 | 42.1 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | PrmA | 79 | 181 | 1.7e-08 | 33.9 | 4.5e-11 | 2.5e-08 | 33.4 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_18 | 81 | 182 | 6.8e-14 | 52.3 | 2.2e-16 | 1.2e-13 | 51.6 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_26 | 81 | 185 | 1.6e-07 | 31.3 | 1.3e-09 | 7.3e-07 | 29.2 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_25 | 82 | 178 | 1.9e-09 | 37.7 | 5.9e-12 | 3.2e-09 | 37.0 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_12 | 83 | 180 | 2.3e-17 | 63.2 | 5.9e-20 | 3.2e-17 | 62.8 |
| pfu_aug1.0_12382.1_39323.t1 | 1 | 1 | Methyltransf_11 | 84 | 181 | 5.1e-19 | 68.5 | 1.4e-21 | 7.6e-19 | 67.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12382.1_39323.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12382.1_39323.t1 atgggtaaccggtgccgactttggacggccatctgtcacattaacccgccttacgtgcagttaagtacatgctgtctacg tgcaaaacgatacgaattatacgatatcaaaggccttgctgagtttatgacaatcgagagacaaagacctggatctattt tctatatcgacagcaattttgtgaaagacaatatagcgccagtcgtgaaatgggtgaaagaagaaaaagatgtttctata aaaataatggacttcggctgtggaaacggtattgttacaattcagattgcgaagtatttgtcagatgtaaacatcgtagg aattgacgaaaacaacatgatcatagaacgtgccaagaaatcagcgcaggatgaacacgtccccaactgtttatttgaag tgtgtaagggagaggatatgaccgaaaaatatgaaggttcctttgacatcgtgttaatgatggatgtccttcatgatctt gcagatcctgatcatgtaatggcgtccgtcaagaaagtcctcaagcccggaggttacttgatagcgattgatcctgcaat gcacagcgatcatagagacaatgtcggtaacatcgccgttggaggttactatttcgtcagcatgtttgtttgtttaccaa gcagtcttactcgagatccaaaggttggacatggcttgggatggggttatgagaataggaaatcctacattgagaagtgt ggatttcgactttgtacgcttaccgaggaagaggatgtgaatgagatgaaaaagagaatcattggcaaaatgatgtga |
|
Protein
| Protein ID | pfu_aug1.0_12382.1_39323.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12382.1_39323.t1 MGNRCRLWTAICHINPPYVQLSTCCLRAKRYELYDIKGLAEFMTIERQRPGSIFYIDSNFVKDNIAPVVKWVKEEKDVSI KIMDFGCGNGIVTIQIAKYLSDVNIVGIDENNMIIERAKKSAQDEHVPNCLFEVCKGEDMTEKYEGSFDIVLMMDVLHDL ADPDHVMASVKKVLKPGGYLIAIDPAMHSDHRDNVGNIAVGGYYFVSMFVCLPSSLTRDPKVGHGLGWGYENRKSYIEKC GFRLCTLTEEEDVNEMKKRIIGKMM |
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