Gene
| Gene Model ID | pfu_aug1.0_1240.1_22500 |
|---|---|
| Locus | scaffold1240.1 : 9393 ... 22725 : - |
| To GenomeBrowser | scaffold1240.1:9393..22725 |
| Genes list of scaffold | scaffold1240.1 |
| Synonym | pfu_aug2.0_4.1_13324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1240.1_22500.t1 | 26 | 1 | Sushi | 11 | 64 | 0.0 | 829.4 | 9.4e-15 | 3.5e-11 | 43.2 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 2 | Sushi | 80 | 136 | 0.0 | 829.4 | 1.0e-12 | 3.7e-09 | 36.7 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 3 | Sushi | 141 | 201 | 0.0 | 829.4 | 3.5e-11 | 1.3e-07 | 31.8 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 4 | Sushi | 206 | 260 | 0.0 | 829.4 | 5.2e-14 | 1.9e-10 | 40.8 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 5 | Sushi | 265 | 318 | 0.0 | 829.4 | 2.8e-13 | 1.0e-09 | 38.5 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 6 | Sushi | 323 | 376 | 0.0 | 829.4 | 1.7e-14 | 6.2e-11 | 42.4 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 7 | Sushi | 381 | 434 | 0.0 | 829.4 | 1.4e-14 | 5.3e-11 | 42.6 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 8 | Sushi | 439 | 492 | 0.0 | 829.4 | 1.6e-11 | 6.0e-08 | 32.9 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 9 | Sushi | 497 | 550 | 0.0 | 829.4 | 1.1e-13 | 4.2e-10 | 39.8 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 10 | Sushi | 555 | 608 | 0.0 | 829.4 | 1.7e-15 | 6.3e-12 | 45.6 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 11 | Sushi | 613 | 667 | 0.0 | 829.4 | 1.8e-16 | 6.8e-13 | 48.7 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 12 | Sushi | 672 | 724 | 0.0 | 829.4 | 8.7e-13 | 3.2e-09 | 36.9 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 13 | Sushi | 727 | 777 | 0.0 | 829.4 | 1.1e-09 | 4.1e-06 | 27.0 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 14 | Sushi | 808 | 839 | 0.0 | 829.4 | 8.4e-10 | 3.1e-06 | 27.4 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 15 | Sushi | 852 | 897 | 0.0 | 829.4 | 2.2e-13 | 8.1e-10 | 38.9 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 16 | Sushi | 902 | 954 | 0.0 | 829.4 | 6.2e-08 | 0.00023 | 21.4 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 17 | Sushi | 964 | 1016 | 0.0 | 829.4 | 4.3e-14 | 1.6e-10 | 41.1 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 18 | Sushi | 1021 | 1077 | 0.0 | 829.4 | 5.9e-15 | 2.2e-11 | 43.9 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 19 | Sushi | 1083 | 1139 | 0.0 | 829.4 | 1.2e-10 | 4.4e-07 | 30.1 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 20 | Sushi | 1144 | 1198 | 0.0 | 829.4 | 3.3e-12 | 1.2e-08 | 35.1 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 21 | Sushi | 1203 | 1255 | 0.0 | 829.4 | 1.3e-11 | 4.8e-08 | 33.2 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 22 | Sushi | 1260 | 1315 | 0.0 | 829.4 | 1.6e-16 | 5.8e-13 | 48.9 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 23 | Sushi | 1320 | 1373 | 0.0 | 829.4 | 5.5e-11 | 2.0e-07 | 31.2 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 24 | Sushi | 1378 | 1431 | 0.0 | 829.4 | 1.5e-14 | 5.6e-11 | 42.6 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 25 | Sushi | 1436 | 1471 | 0.0 | 829.4 | 9.6e-08 | 0.00036 | 20.8 |
| pfu_aug1.0_1240.1_22500.t1 | 26 | 26 | Sushi | 1473 | 1526 | 0.0 | 829.4 | 2.4e-10 | 9.0e-07 | 29.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1240.1_22500.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1240.1_22500.t1 atgctccattttgtgctctattccgtggactgtggctacccagggtccgtagataacgggttcgtagaaggaaaccgttt tcagtatgacagtcgcgtgagatataaatgcgagaagggatatcgacttattggagacaggacgttatactgcaactcct ctggagaatgggagggacagcggccagtatgccaaaatgctattattgacaaaaacgtttatcttacaggaatctcctgt cctttgcccttgttgtctaataatacagcagtagttaatagacagaattcatacttcccgggcgatgtcgctacgtttac ctgtacacctggaaatagactctttacgtcacacaactctgttacatgtcagggcgatgggagttgggataaaagtgtcc ctacctgtgatccggaaaaatgtaggtcacctccaagcattgttaatggaaaatatactgacattctccaagaatatggt gttggacattctctgcagtatcagtgtgacgacggatacgaattttcgctgaacagtttaaatccgactggagtaatcaa ctgtcttccaacgggacaatgggaatcgaacactcctcaatgttcaccagtctcatgtccggttccgcccaatgtattga atgctcgagtcacatatgattctcttcagttcgggtcttcggccagatatcaatgtaatgatggctatgtcagtgacgat ttctacgacgaaatagtttgtacggtggatggaagctgggatcaagagccaccttcatgtagaccagtaaactgcggtga tcctggtttattaattaacggaatagcaagagctgaacaaactactttcggttcatatgttacataccaatgtgatcccg gctattctctttcagggtcaaatactcgcgcatgtctgtctaattcctcatggggtggagttacaccttcttgccggcca gtatcatgcggagccccatcaagaattagtaacggcttttacatcggaagggattacacgtttggaaatacagtcacgta tgcttgtgatgctggatttaatttggttggagaatcagactcactttgtcaagcaaacggtagatggagtgtacagagac cgcgatgcagaagaaaagattgtaaagatccaccaaccattccacatggtagttttacagaggacagatatgtctttggt gactctgttacatacacatgcgaatttggctacgaaatagtcgagaacaactccacagagtgtttgtccgatacggaatg gaaaactccaattcctagatgtgaaccgatttcatgtggagagctagaagtaatagaaaatgggaactacacttcaactt cctttacatctggtggattggtggaattttactgtgatgaaggattcattcttaaaggggagtctatcagaatatgccag ccatacggatattggtcaggaggacagccaacttgtgaacctggaaaatgcagggcaccacctttaattgataatgggaa agtagattacaaagacttatcgtttaaatctgttgtgatttacagctgtaatgcgggctatacactgaacggtcttgatg tcaggcgctgccagcaaaaccttacgctgagtggtgaggaacctgtttgtcttccaaaggcatgtagagatccaggtgac attgcccatgggacaaagtcgtcgaccggtcttctctttaactcagtcgtaacttatcagtgtgatacaggttacaccct aagaggagatgctcgtctgacgtgcaattccaatagtgaatggtctggtaacgtcccatcgtgtgaactcgttgaatgtg aaagtccatcgagagtaacatcaaatggcagaatgataggagatgatttttcatacggtgcaactatatcttatgaatgt gatccaggatataatctcgtgggatctaaaaatagaacatgccaagataatggagaatgggatgaaaagatacccatatg tgaagtagtgcaatgtagacgacccacaataagaaatggattcccatcgggttttcgaacagagtacaatacaagaatct cttttagttgtaggaggggatatgctttatttggtccttcggaaaggaggtgcctcgaaaatggaacgtggagcggacca gatcctttatgtgtaaagtgtgctcaaccacctcctgtaaattttggaactgtgtctataagaaatttcaaaacagcagt gtatcagtgcaatccaaacttcattcttattggaaaatccgacttggaatgccagattaatggatcatggaatggttcac ctcctcgttgtgaagttatgggatgtaacagctctgaactaaacatccagtcatttagatcaggcaaagtgaatgttagt gggaatggacgagatagcattgcagagtatatttgtgacagaggttacagattgttgggagaatccagaagacagtgttc ggaggatggaagctggagcggcaatgcgcctatctgccttattgtaacatgtccaggatctttctcgataagaaatggaa gaatattaggaagcaactatacttatcgttcaaacttgacgttcgaatgtcaagaaaattaccggctagttggagaacaa tatatcacatgtcaggaaaatggactttggagtggaaatgcacctacatgtgaagaaatcacttgtccatctcttgatcc acttccgtttggtagaatcactgtagcatccatatcagttggaagcgaagccatatatacttgcaacactggatatgaaa tacgagaactcagctcaagtcaagcaaagcgaacatgcactgtggatggactgtggtctgacatacattacacttgcgat gtaattcgatgtcctaatgttagtattgagaatggtgcaattatcggttcgtcctacacgatcggttctcaaattcgtta cgaatgtaacgagggataccgtcttaatggaatccctatcagaatatgcttgtacagtaagatgtggtccgggcccgatc ctgaatgtctaccagttcaatgtcaaagacctcctccaatcgcaaatggcgtcatattggataacggcagaacctcatac tattatggcgatatgatacaatacacatgtcaaaatggatatatacttctaggaaattcagatagaacttgtcagtccaa tatgcaatggtcgggcttagcatcgacttgttcaagagtgtcttgtagtggtttaccagttattgcaaatgcagagacaa gattactgaacaataccatttctttcggcgatatggctgttgttgaatgtattgaaggttaccagttgagtagtaattct tccgcaatatcaacgtgtaattctgatggattttggtcgaatgtaaatgcagaatgtcttcgtataaaatgtcctacttt gcctgccgttacgaatggacgattttcctcggacaatcgagactataacacggagatcactataagctgtgataccgggt atcgagtgaatggacagtcgtctttcacttgcttgagcaacgcaaagtggagcacagaacggctaccaacatgcaacatt gtattgtgctccgaacctgacctcgttaatggaatagcagaatatgctggtttgacttatggcagtgaagtcgtgtatag gtgcagaaggggatatgaaatacaagggtctgaaaacagaacttgtaatgcctctggtgcatggacgggtatacaaccct tctgtagagaaacgctctgtcatgcaccaccagttataccctatggaagagttcagtttttgcataatcattacactccc ggtgccgtcgttaaatatgactgtgacagagggtataggcctctggaaaatgatactatgacctgctcttcaagtggtca gtgggagggagctattccacgatgtgtcaaaatcacatgtgctcgaccagtgtctccaagaaatggtagagtagtgtaca atgatatttcgtttggaaacaatatatctttctcgtgtaatcctggatttgaattgcgaggttcctctattgccacttgt cttgaaacagggctttacagtaacgacgccccatcatgtgtccctgttaattgtggattcccaggatcagttccccatgc atatgttattggagatgcgtatatatttgggagtgtcgttacatacttgtgtgaggagggatatgacctgattggagacg acaatattgtatgtttagagactgcacgttggtctggggcgccacctgtttgtaatcctgtctcttgtggaagaccacca gaaatcaataatgcaagaaggatgggtgacgaattcacttacagacgaatggtttattatgcatgtgagaagggatatga gttatctggaatttcttgtggaaaaccagtcatcagagattttgttaacgtaatacaatttcgtggacgttcgtactttt acggcgataaggtttactaccgatgtcggccgggtgtaagaccgctgaaaatacccccggtgctgacgtgtacagcaact aaacaatgggatggtcaaatagggtgctcaatgccttgtaaagggggatgtatgaacggaggcacgtgtatgggactgcg tggctgtaaatgtccaaatggttttggcgggaaaaggtgtcagaaagcattatgtatattaccctgtttgaatggcggga gctgtattgcaccatataaatgttcctgtagagagggatatactggatcgaggtgtcagaccaccatctgtgaccctcca tgtgagaatggtggatattgtgtaaaacccaataaatgccaatgtcagcacggctatatactgccatattgtagagaaag agacgaacatgatcactcaaaattcagaaatctgccacgacagcgtcaaacagaaaccacaacatctggatggtttaata gataa |
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Protein
| Protein ID | pfu_aug1.0_1240.1_22500.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1240.1_22500.t1 MLHFVLYSVDCGYPGSVDNGFVEGNRFQYDSRVRYKCEKGYRLIGDRTLYCNSSGEWEGQRPVCQNAIIDKNVYLTGISC PLPLLSNNTAVVNRQNSYFPGDVATFTCTPGNRLFTSHNSVTCQGDGSWDKSVPTCDPEKCRSPPSIVNGKYTDILQEYG VGHSLQYQCDDGYEFSLNSLNPTGVINCLPTGQWESNTPQCSPVSCPVPPNVLNARVTYDSLQFGSSARYQCNDGYVSDD FYDEIVCTVDGSWDQEPPSCRPVNCGDPGLLINGIARAEQTTFGSYVTYQCDPGYSLSGSNTRACLSNSSWGGVTPSCRP VSCGAPSRISNGFYIGRDYTFGNTVTYACDAGFNLVGESDSLCQANGRWSVQRPRCRRKDCKDPPTIPHGSFTEDRYVFG DSVTYTCEFGYEIVENNSTECLSDTEWKTPIPRCEPISCGELEVIENGNYTSTSFTSGGLVEFYCDEGFILKGESIRICQ PYGYWSGGQPTCEPGKCRAPPLIDNGKVDYKDLSFKSVVIYSCNAGYTLNGLDVRRCQQNLTLSGEEPVCLPKACRDPGD IAHGTKSSTGLLFNSVVTYQCDTGYTLRGDARLTCNSNSEWSGNVPSCELVECESPSRVTSNGRMIGDDFSYGATISYEC DPGYNLVGSKNRTCQDNGEWDEKIPICEVVQCRRPTIRNGFPSGFRTEYNTRISFSCRRGYALFGPSERRCLENGTWSGP DPLCVKCAQPPPVNFGTVSIRNFKTAVYQCNPNFILIGKSDLECQINGSWNGSPPRCEVMGCNSSELNIQSFRSGKVNVS GNGRDSIAEYICDRGYRLLGESRRQCSEDGSWSGNAPICLIVTCPGSFSIRNGRILGSNYTYRSNLTFECQENYRLVGEQ YITCQENGLWSGNAPTCEEITCPSLDPLPFGRITVASISVGSEAIYTCNTGYEIRELSSSQAKRTCTVDGLWSDIHYTCD VIRCPNVSIENGAIIGSSYTIGSQIRYECNEGYRLNGIPIRICLYSKMWSGPDPECLPVQCQRPPPIANGVILDNGRTSY YYGDMIQYTCQNGYILLGNSDRTCQSNMQWSGLASTCSRVSCSGLPVIANAETRLLNNTISFGDMAVVECIEGYQLSSNS SAISTCNSDGFWSNVNAECLRIKCPTLPAVTNGRFSSDNRDYNTEITISCDTGYRVNGQSSFTCLSNAKWSTERLPTCNI VLCSEPDLVNGIAEYAGLTYGSEVVYRCRRGYEIQGSENRTCNASGAWTGIQPFCRETLCHAPPVIPYGRVQFLHNHYTP GAVVKYDCDRGYRPLENDTMTCSSSGQWEGAIPRCVKITCARPVSPRNGRVVYNDISFGNNISFSCNPGFELRGSSIATC LETGLYSNDAPSCVPVNCGFPGSVPHAYVIGDAYIFGSVVTYLCEEGYDLIGDDNIVCLETARWSGAPPVCNPVSCGRPP EINNARRMGDEFTYRRMVYYACEKGYELSGISCGKPVIRDFVNVIQFRGRSYFYGDKVYYRCRPGVRPLKIPPVLTCTAT KQWDGQIGCSMPCKGGCMNGGTCMGLRGCKCPNGFGGKRCQKALCILPCLNGGSCIAPYKCSCREGYTGSRCQTTICDPP CENGGYCVKPNKCQCQHGYILPYCRERDEHDHSKFRNLPRQRQTETTTSGWFNR |
|