Gene
| Gene Model ID | pfu_aug1.0_1240.1_22501 |
|---|---|
| Locus | scaffold1240.1 : 22934 ... 30035 : - |
| To GenomeBrowser | scaffold1240.1:22934..30035 |
| Genes list of scaffold | scaffold1240.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1240.1_22501.t1 | 5 | 1 | EGF | 54 | 60 | 1.4e-16 | 60.1 | 0.82 | 1500.0 | -0.8 |
| pfu_aug1.0_1240.1_22501.t1 | 4 | 1 | EGF_2 | 54 | 60 | 1.9e-06 | 27.9 | 0.3 | 560.0 | 0.8 |
| pfu_aug1.0_1240.1_22501.t1 | 3 | 1 | Sushi | 73 | 128 | 4.3e-18 | 65.4 | 2.4e-11 | 4.4e-08 | 33.3 |
| pfu_aug1.0_1240.1_22501.t1 | 3 | 2 | Sushi | 133 | 184 | 4.3e-18 | 65.4 | 3.9e-12 | 7.2e-09 | 35.8 |
| pfu_aug1.0_1240.1_22501.t1 | 3 | 3 | Sushi | 193 | 247 | 4.3e-18 | 65.4 | 2.1e-08 | 3.9e-05 | 23.9 |
| pfu_aug1.0_1240.1_22501.t1 | 5 | 2 | EGF | 223 | 230 | 1.4e-16 | 60.1 | 0.69 | 1300.0 | -0.5 |
| pfu_aug1.0_1240.1_22501.t1 | 2 | 1 | HYR | 254 | 333 | 2.8e-37 | 126.5 | 1.6e-22 | 3.0e-19 | 68.8 |
| pfu_aug1.0_1240.1_22501.t1 | 2 | 2 | HYR | 335 | 412 | 2.8e-37 | 126.5 | 5.1e-19 | 9.5e-16 | 57.5 |
| pfu_aug1.0_1240.1_22501.t1 | 5 | 3 | EGF | 441 | 469 | 1.4e-16 | 60.1 | 2.2e-08 | 4.1e-05 | 23.4 |
| pfu_aug1.0_1240.1_22501.t1 | 4 | 2 | EGF_2 | 441 | 472 | 1.9e-06 | 27.9 | 6.8e-06 | 0.013 | 15.6 |
| pfu_aug1.0_1240.1_22501.t1 | 5 | 4 | EGF | 479 | 508 | 1.4e-16 | 60.1 | 2.0e-10 | 3.7e-07 | 29.9 |
| pfu_aug1.0_1240.1_22501.t1 | 4 | 3 | EGF_2 | 479 | 510 | 1.9e-06 | 27.9 | 3.8e-05 | 0.07 | 13.3 |
| pfu_aug1.0_1240.1_22501.t1 | 5 | 5 | EGF | 510 | 547 | 1.4e-16 | 60.1 | 4.7e-11 | 8.7e-08 | 31.9 |
| pfu_aug1.0_1240.1_22501.t1 | 4 | 4 | EGF_2 | 517 | 547 | 1.9e-06 | 27.9 | 4.5e-08 | 8.4e-05 | 22.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1240.1_22501.t1 | gi|321466601|gb|EFX77596.1| | hypothetical protein DAPPUDRAFT_30003, partial [Daphnia pulex] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1240.1_22501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1240.1_22501.t1 atgatgattattatttttcaacaaacggcattatttcatgttgcagcatgtcctcctggcacgtacaagtctgagatgaa tccaggagatgtaagttcatgtaaaaagtgtcctgacgagaaccatataacagagatcggatctacagatgcatctgact gcacctgtaaaagaggattcagagatttcaacactactggctgtgctgctctcagatgtcctgccctccaggaacctaaa aatggatattttgtgaacagtaaatgtgacaatgtattcaatgctgcatgtggaataaaatgtaatcctggatatgagct acgaggcacaagtctgagaatctgtcaggacaccggggaatggtcaggggagcaagcagaatgtattttgaaaacatgcc ccgccttacctaagcctaagaatggaaacatgatctgtgaccgggacgacttttctttttccaccgagtgtcggtttaca tgtgacagtggctataagcttgttggttccaggaagagggaatgtctggccatctcattctggaccggtatcaccacaag gtgtagagagatttattgtcatccactccccaagattgaggacggcaacatcactccagcactttgtaccgacaaagatg tcatattcggcactgtgtgtcaaatagaatgtcaccaggggtacactttgaaaggcccaactagtaagcagtgtacaaca gaaggactttgggcaccgtctcgggacggcttttgtgaagatgccagtccgccaattgttttatgtccaagagatatcag tgtcgtagcagacgacgaggaaagcaccgctaacgttacgtgggacgaacctgttacgttcgacaactccggtgtgcatc caagtattaaaacagtacctgtaccacctgatctgttcccaatcggtcttacttatgtgaagtacatagcagtagattca aatggaaaccgagcaaaatgcaggttttctgtggaagttagagatgtaacaccaccacgagtagacagatgctactcacc cgcaccgtttgtgtcctcagccttgtacgctaatgtttcatgggaagaaccagtatttagtgacaattctgaagaaacac caaggatagagcgatcacatgcccctggattattcccacgagggaaaacaatcgtaacttatacagcttttgatgaaagt ggtaataacagtacgtgtgatattgaaattactgttgtcgggggacgaacaaccgactatgaggaagttcaagcagacga gagtcccctcaaccaacaaccagagatagcaatcaatgactgtttttcaaaccaatgccaaaatggcggaacctgtgtat cacaagagttaggttacacatgtaactgtgtacctggatatagaggaaacaattgtgaagaagagatcaatgaatgtgag ggaaaaccatgtctgaataatggaacgtgtaaagatttactgaacgacttttcatgcacctgtcatccgggatatgaagg gaagaagtgtgaagaaaatgtcgacgaatgcatgtcagcaccatgcaacaataatggcacatgtgtggatttggtcaacg attacacttgcaactgtcccgatggctttgagggtaaatattttaaagacaaatcagacaaatcggtgcttaattcattt taa |
|
Protein
| Protein ID | pfu_aug1.0_1240.1_22501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1240.1_22501.t1 MMIIIFQQTALFHVAACPPGTYKSEMNPGDVSSCKKCPDENHITEIGSTDASDCTCKRGFRDFNTTGCAALRCPALQEPK NGYFVNSKCDNVFNAACGIKCNPGYELRGTSLRICQDTGEWSGEQAECILKTCPALPKPKNGNMICDRDDFSFSTECRFT CDSGYKLVGSRKRECLAISFWTGITTRCREIYCHPLPKIEDGNITPALCTDKDVIFGTVCQIECHQGYTLKGPTSKQCTT EGLWAPSRDGFCEDASPPIVLCPRDISVVADDEESTANVTWDEPVTFDNSGVHPSIKTVPVPPDLFPIGLTYVKYIAVDS NGNRAKCRFSVEVRDVTPPRVDRCYSPAPFVSSALYANVSWEEPVFSDNSEETPRIERSHAPGLFPRGKTIVTYTAFDES GNNSTCDIEITVVGGRTTDYEEVQADESPLNQQPEIAINDCFSNQCQNGGTCVSQELGYTCNCVPGYRGNNCEEEINECE GKPCLNNGTCKDLLNDFSCTCHPGYEGKKCEENVDECMSAPCNNNGTCVDLVNDYTCNCPDGFEGKYFKDKSDKSVLNSF |
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