Gene
| Gene Model ID | pfu_aug1.0_1240.1_22503 |
|---|---|
| Locus | scaffold1240.1 : 46057 ... 53295 : - |
| To GenomeBrowser | scaffold1240.1:46057..53295 |
| Genes list of scaffold | scaffold1240.1 |
| Synonym | NA |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1240.1_22503.t1 | gi|260806615|ref|XP_002598179.1| | hypothetical protein BRAFLDRAFT_69505 [Branchiostoma floridae] | 2.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1240.1_22503.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1240.1_22503.t1 atgtcatggaatgtcgtccatatagttctctaattgattcctttttggacatatatatttcctgtgacatttcttatcaa gaatatttttattcattttgaaattttagaaatttcttcttatgaattttttgcaattatgtctgcttctactcacattc cttgtgtggttgtgaatggaatggcaaaaaacaaagcctataagatcggtgaaccaatcgaacacgaagaaatagcagct cagtggaatgctgtgtatatccagggtgaatggcgtttacttgacgcatactggggtataacgtgcgtcaaagtggatac tggtagggtagaggaatacgatgacgagggagatctgatatcgacgacagaggagtactacgtagacgatgaagaagaag aggatttcgccacgacatcttacgccaaaatcgtccacagagagccagtggatgaacagtacttcttcacggaccctaga cagcttatctggactcacttcccagaggaagaaaaatggcagctgctgaagaatccgatctctgagcaggaatgggaggg tcagctttatatgagagagaggacgcacgagatgggaataaaggtcaacaagaggaaacatggcagaactgttattgatg caaaagatgggaaggcagacattgttctatggctcccggaggacaggagcgattcttaccaattcaaatactcattttac agaactgaagtaactcatgaaagaagacctatagacaaaatactcaatagattcactatatttgatcacatgaaggatag gattcactttaagtatcttccgatagaaggagagtattctttcaatgttcatgcgaagaaaagatcacagccaaacaaac tgtaccatgcatttgcatatctcattcaatcgaccggaagagtcatagagaaaggtcaaacaaacaccaccaaaggcaac acaaaccggagtttctggagagactgcacggagatacatacagaaactatagagaccaaagacgacgatgtttgtgtacc tgtacctagaggaatcgatcatctagaggtttatgtggagaagaaggaatcccacgaccctccatcatctaagactatag aagcggtgacagaaaagggagtcgatttgtacaaagtaaaagtcgacaatttgggtgaatatttcataaacatatacgag aggaaaaacctggagtttctcaagagtaaagccaaatacgtcgttcgaaaaatacacgtggatgaagcggaagagaagga cttcaatgaagttatggaaattattcgacaagagagaatccgggcaggaaaagacgtcacacaggccgacaaactgaaga aacaaatacaagaagtcaaagcatctaaagttggagttaacgagagaatcatcttgacccaacggttaaaggaggctata gaatccaagaatctccaccagttacggcgtgccatgaaggaatacgagtatatcaaaccaaacaaaaacgatgatctact tcaacaagccttaaaacttctcaaagagatagaattcaaagaagatttaatacgtgcctacaaagaccaggatttacagg cgcttgatcgtgtactaagagacgctagtaaaaggttagcccaggaccccatcacgcagcagagagtagcgttagcaaag cggctacgcgaccggctggcggctcagaataatctccgtgacatggtactgaaaacgaacattaataccatcacagaact gcgcaaactccacacgccaccggaaccagttaaaaagacgattcaggcagcttttattgtcatgggacatccccaaaaag aagtggagaattggaaaaaatgtctggctttgctggggaagagagatccagattctctgagacggcgaatggccgatata gaacccaatgacgtcaaacgggaagacgcttgtgaagcaagggacattatagaaccatatacagctgataaactccgata cattagccccgcagcggcagcattctatcagtggacggcagaggttattcgagaagtagaagcgatgtccggaaagcttc cccaaaagaaggtcgctcctccaccaaaaacaaaaacaccagcaccccgggcgccttcccctccccctccacctgtacca tcgccaaagaaaaagagagaaccgaaaacgaaatacgtcacgctagattctctgtttccagctaacgaaaagaacaaaca accaccaaatgttgaagaaacagagaaaaagatgactgaaaatccgtctggaaaatccccggatggaaaggaaagtccta ctaggtctgacagccgatcatatacaagacgttttcagaagaaaaatgattatatggcctctaaaaatcgcggtcgacca aaatctgatcaaccgattacacaggtgaaagaggcagataaaaacgagaagcttgattcacaggatccaaagaaaggcaa cacaaataaaggaaaagaaaataaagagccttctagtcccagaaagacaaaccgaccaggtgctcagaacaaagacacca ctgacaaagcagggggtcaaaacaaggatccgaaaaaccgaggtgctgatgggaacgcacagaaaaaagattatggttcc ggtaatgataaaaatgataatccaaaacagaataacaacggagctgataatagtgcgaataatactggactgaattcacc aaaggcgaaaccagggttccaaaaggcaggcggtaataaggacggtttacagagtcctagaaagcctgtcaaaggcaaac ctccgcccgtgcaagaaaccccgtatgataattatttacaggggtataaggcagacttaaattctagacagcctgatatt ctggaaatcaaacacgatgatgatgatgacgacgaatttatagatccaaacggatacactgccagattcagaaagaaaag acaatatatgcagggaaacaggagagcgtga |
|
Protein
| Protein ID | pfu_aug1.0_1240.1_22503.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1240.1_22503.t1 MSWNVVHIVLXLIPFWTYIFPVTFLIKNIFIHFEILEISSYEFFAIMSASTHIPCVVVNGMAKNKAYKIGEPIEHEEIAA QWNAVYIQGEWRLLDAYWGITCVKVDTGRVEEYDDEGDLISTTEEYYVDDEEEEDFATTSYAKIVHREPVDEQYFFTDPR QLIWTHFPEEEKWQLLKNPISEQEWEGQLYMRERTHEMGIKVNKRKHGRTVIDAKDGKADIVLWLPEDRSDSYQFKYSFY RTEVTHERRPIDKILNRFTIFDHMKDRIHFKYLPIEGEYSFNVHAKKRSQPNKLYHAFAYLIQSTGRVIEKGQTNTTKGN TNRSFWRDCTEIHTETIETKDDDVCVPVPRGIDHLEVYVEKKESHDPPSSKTIEAVTEKGVDLYKVKVDNLGEYFINIYE RKNLEFLKSKAKYVVRKIHVDEAEEKDFNEVMEIIRQERIRAGKDVTQADKLKKQIQEVKASKVGVNERIILTQRLKEAI ESKNLHQLRRAMKEYEYIKPNKNDDLLQQALKLLKEIEFKEDLIRAYKDQDLQALDRVLRDASKRLAQDPITQQRVALAK RLRDRLAAQNNLRDMVLKTNINTITELRKLHTPPEPVKKTIQAAFIVMGHPQKEVENWKKCLALLGKRDPDSLRRRMADI EPNDVKREDACEARDIIEPYTADKLRYISPAAAAFYQWTAEVIREVEAMSGKLPQKKVAPPPKTKTPAPRAPSPPPPPVP SPKKKREPKTKYVTLDSLFPANEKNKQPPNVEETEKKMTENPSGKSPDGKESPTRSDSRSYTRRFQKKNDYMASKNRGRP KSDQPITQVKEADKNEKLDSQDPKKGNTNKGKENKEPSSPRKTNRPGAQNKDTTDKAGGQNKDPKNRGADGNAQKKDYGS GNDKNDNPKQNNNGADNSANNTGLNSPKAKPGFQKAGGNKDGLQSPRKPVKGKPPPVQETPYDNYLQGYKADLNSRQPDI LEIKHDDDDDDEFIDPNGYTARFRKKRQYMQGNRRA |
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