Gene
| Gene Model ID | pfu_aug1.0_12403.1_03229 |
|---|---|
| Locus | scaffold12403.1 : 1 ... 13347 : + |
| To GenomeBrowser | scaffold12403.1:1..13347 |
| Genes list of scaffold | scaffold12403.1 |
| Synonym | pfu_aug2.0_7093.1_12919 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12403.1_03229.t1 | 1 | 1 | MAM33 | 65 | 253 | 4.7e-21 | 75.4 | 1.8e-24 | 1.4e-20 | 73.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12403.1_03229.t1 | gi|354469583|ref|XP_003497207.1| | 9.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 2 |
| mantleEdge | 1 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_12403.1_03229.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12403.1_03229.t1 atgatcaactactgcgatgtatatacgcgagtcagtactgtggcgggaattaggctagaaacgtttcgtttcgtttcgtt tccatttcgtttcgtttcgtttttcattgcgtttcgtgtccatttcgtttcgtttcttttcgtttcgcattttacagctt cggagccaatagacgcagagttttcacagtttttgtcagaagagatagcaagagaacaagagtcccataaagatcatcaa gaagttaaaacagtggaaggatggacaccagaattcaaaggaacagatgtcgttttatcaaagtcacacaaaaatgaaaa aatttcagttaaatttaatattgttgattctgtggatgtagcagatgatagtctggaatctgaggaaacaaaggatgtca agggtacacccatgcatgcagaatttggatcaataaatgaaagagtctactttccttttctgttgtgtttttgtgttagc attttgttggtcctcaataggacagattttcaaattaaaaactgcatgcatcgtgataaattccagatcctagagatagc tcttcacgacagtgaaatatccagtacatcatactctgcccaaacatcaacaatggatgctagtatgtatgagatgttaa tggacatgctggatgacagaggtattgatgacaagtttatggatcagcttctgaatttctgtactgactacgaacacgca cagtatatcaagttcctcggagatcttaagtcgtttgtagataccaagtga |
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Protein
| Protein ID | pfu_aug1.0_12403.1_03229.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12403.1_03229.t1 MINYCDVYTRVSTVAGIRLETFRFVSFPFRFVSFFIAFRVHFVSFLFVSHFTASEPIDAEFSQFLSEEIAREQESHKDHQ EVKTVEGWTPEFKGTDVVLSKSHKNEKISVKFNIVDSVDVADDSLESEETKDVKGTPMHAEFGSINERVYFPFLLCFCVS ILLVLNRTDFQIKNCMHRDKFQILEIALHDSEISSTSYSAQTSTMDASMYEMLMDMLDDRGIDDKFMDQLLNFCTDYEHA QYIKFLGDLKSFVDTK |
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