Gene
| Gene Model ID | pfu_aug1.0_12413.1_46503 |
|---|---|
| Locus | scaffold12413.1 : 34815 ... 48975 : - |
| To GenomeBrowser | scaffold12413.1:34815..48975 |
| Genes list of scaffold | scaffold12413.1 |
| Synonym | pfu_aug2.0_75.1_16860 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12413.1_46503.t1 | 3 | 1 | Ank_2 | 2 | 36 | 2.4e-12 | 47.0 | 4.9e-05 | 0.1 | 12.9 |
| pfu_aug1.0_12413.1_46503.t1 | 2 | 1 | Ank_5 | 2 | 36 | 1.7e-11 | 43.9 | 2.9e-06 | 0.0061 | 16.7 |
| pfu_aug1.0_12413.1_46503.t1 | 2 | 1 | Ank_4 | 2 | 36 | 3.1e-10 | 40.2 | 0.00012 | 0.26 | 11.8 |
| pfu_aug1.0_12413.1_46503.t1 | 3 | 1 | Ank | 17 | 36 | 1.0e-09 | 37.6 | 0.0087 | 18.0 | 5.3 |
| pfu_aug1.0_12413.1_46503.t1 | 2 | 1 | Ank_3 | 17 | 33 | 6.8e-06 | 25.8 | 0.23 | 480.0 | 1.5 |
| pfu_aug1.0_12413.1_46503.t1 | 2 | 2 | Ank_5 | 40 | 79 | 1.7e-11 | 43.9 | 1.4e-08 | 2.9e-05 | 24.1 |
| pfu_aug1.0_12413.1_46503.t1 | 3 | 2 | Ank | 40 | 69 | 1.0e-09 | 37.6 | 1.4e-09 | 2.9e-06 | 26.7 |
| pfu_aug1.0_12413.1_46503.t1 | 2 | 2 | Ank_3 | 40 | 63 | 6.8e-06 | 25.8 | 1.8e-07 | 0.00038 | 20.4 |
| pfu_aug1.0_12413.1_46503.t1 | 3 | 2 | Ank_2 | 41 | 79 | 2.4e-12 | 47.0 | 3.6e-10 | 7.6e-07 | 29.3 |
| pfu_aug1.0_12413.1_46503.t1 | 2 | 2 | Ank_4 | 41 | 79 | 3.1e-10 | 40.2 | 3.4e-09 | 7.2e-06 | 26.3 |
| pfu_aug1.0_12413.1_46503.t1 | 3 | 3 | Ank | 73 | 79 | 1.0e-09 | 37.6 | 0.13 | 280.0 | 1.6 |
| pfu_aug1.0_12413.1_46503.t1 | 3 | 3 | Ank_2 | 282 | 344 | 2.4e-12 | 47.0 | 0.22 | 460.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12413.1_46503.t1 | gi|72011092|ref|XP_783557.1| | 4.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_12413.1_46503.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12413.1_46503.t1 atgttacttcagcttgggaaatgtgacgtgaacgtacgtgacgaggaccagcttacttcacttcacgacgccatcatgca taaacactccaatatagttcctctattggattttcatttttcaccacttcatattgctgccgtgaatggaagcctagaga ttgtagatttcctcctccttcatggggctctatcagataccagagataaagatttcatgacaccattacatagggcaaag tttggccgaagacatttctatttcaaccttgcttcctatttcctctttctgtcatcactgactgcctacattgcttctgt gccattgattaacaccacattacttgatgacgtccgaaactgtcctattgaactaaatgaatcggagagaaacaatcaaa ctgccatagaatactacaaaaaggtcatgttccttcttgtaatgtttgttatgtcctggtcgcaagctttttccattgtg ttacctaatacgccaggatttcgaagagaatcaaatgatgtttaccctattaccgttcttgccatgatgcttggagaact gaattttatcactaactttgtcacgtcggatacgtcgccctttatgatagacaactatatccttatcttatcttttatga ttactattcctttgtctcttatgaatctactgatcggtatagctgttggcgatattgaaaagattcagaaacaagcttat ataaaacgacttggtattcagattgatgaaatatgtttgttagagagcagatcatttagattcattcagagaaaaatcta ccaaagatattttgaaagaaagccaaacaaagaaaaacagtcttgcattgatacgctgtacaacttcttccatggtgctg atgataactttattactgaagagaaagaggacacaacaaaaatagcggtagatgaaatcagagaagatgttaagaagaca aagcatcagatttcagtattgatgtcttcccagaagcagacccacgagttggtgcgtcagttatgtgagcagatgaatct taacacaaagcttgatacgctctctgtcgtagactccatgagaacagggatggcaagcagagcggggggttacctaggcc gaagggactccaaatttgactga |
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Protein
| Protein ID | pfu_aug1.0_12413.1_46503.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12413.1_46503.t1 MLLQLGKCDVNVRDEDQLTSLHDAIMHKHSNIVPLLDFHFSPLHIAAVNGSLEIVDFLLLHGALSDTRDKDFMTPLHRAK FGRRHFYFNLASYFLFLSSLTAYIASVPLINTTLLDDVRNCPIELNESERNNQTAIEYYKKVMFLLVMFVMSWSQAFSIV LPNTPGFRRESNDVYPITVLAMMLGELNFITNFVTSDTSPFMIDNYILILSFMITIPLSLMNLLIGIAVGDIEKIQKQAY IKRLGIQIDEICLLESRSFRFIQRKIYQRYFERKPNKEKQSCIDTLYNFFHGADDNFITEEKEDTTKIAVDEIREDVKKT KHQISVLMSSQKQTHELVRQLCEQMNLNTKLDTLSVVDSMRTGMASRAGGYLGRRDSKFD |
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