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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12461.1_68505
Locus scaffold12461.1 : 249 ... 13425 : -
To GenomeBrowser scaffold12461.1:249..13425
Genes list of scaffold scaffold12461.1
Synonym pfu_aug2.0_680.1_01038

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_12461.1_68505.t1 gi|158259705|dbj|BAF85811.1| N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase [Todarodes pacificus] 5.0e-36

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_12461.1_68505.t1
Definition-
>pfu_aug1.0_12461.1_68505.t1
atgatccattttttgaacgcagaaggacgttattacgctgctcttccaaatgtgacttccgaatatgcaggaaacggaag
tagtttcttttggcgggaagtttggagtcatccaggactagacatccttggtactccgcagttcaagtttttaccgaatt
tcaaaaatccatgttggtatgagccattagttgaatccaatgtttaccagaacaacaaattcgcggtagtatcgatgaat
gcgcgtcgctccatgatggaattgatggaaacatggacagacagactgacaaaagacaagaatgccaaaaggcttcgttg
tttgccgtatttcatgatcgttggtcagccaaaatgtgccagtacggacatctacaaaaagatcatgaagcatcctgatg
cggttccgcctcctataaaggaacttcattggtggtcccgtaatagacaaggcagaaggatcaactatacggacataatt
ccattaacccagtacattgatatgtttgataaggcagctttatacatagagaaaaggtcagaggaaatgggagagcctga
tatagattaccataaaatcatcacaggagacggtagtgtttcggtattctgggagaacgatgattggtggcatttccccg
agaaccaaggtcataccgagcctagatacactaatgctgactacatacatcacgtgattcctaatgcaaagatcatagtc
agcgtccgaaacccgacagacagttttgctcttaccctgtga

Protein
Protein IDpfu_aug1.0_12461.1_68505.t1
Definition-
>pfu_aug1.0_12461.1_68505.t1
MIHFLNAEGRYYAALPNVTSEYAGNGSSFFWREVWSHPGLDILGTPQFKFLPNFKNPCWYEPLVESNVYQNNKFAVVSMN
ARRSMMELMETWTDRLTKDKNAKRLRCLPYFMIVGQPKCASTDIYKKIMKHPDAVPPPIKELHWWSRNRQGRRINYTDII
PLTQYIDMFDKAALYIEKRSEEMGEPDIDYHKIITGDGSVSVFWENDDWWHFPENQGHTEPRYTNADYIHHVIPNAKIIV
SVRNPTDSFALTL

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