Gene
| Gene Model ID | pfu_aug1.0_1248.1_36894 |
|---|---|
| Locus | scaffold1248.1 : 131677 ... 141055 : - |
| To GenomeBrowser | scaffold1248.1:131677..141055 |
| Genes list of scaffold | scaffold1248.1 |
| Synonym | pfu_aug2.0_1661.1_05171 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1248.1_36894.t1 | 1 | 1 | Pkinase | 3 | 203 | 6.7e-36 | 123.7 | 2.5e-39 | 9.3e-36 | 123.3 |
| pfu_aug1.0_1248.1_36894.t1 | 1 | 1 | Pkinase_Tyr | 4 | 129 | 2.4e-13 | 49.7 | 9.5e-17 | 3.5e-13 | 49.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1248.1_36894.t1 | gi|296232152|ref|XP_002761459.1| | PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 1A isoform X1 [Callithrix jacchus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1248.1_36894.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1248.1_36894.t1 atgttccggaatcatttatgtctggtgtttgaacttctatcctacaatctctacgatttattacggaacactaattttag aggtgtgtccttgaacttgactcgaaagtttgctcaacaattgtgcacggcgttactatttttagcaacaccggaactga atgtgattcactgtgatcttaagccggagaacattttgctgtgtaatccaaaacgtagtgcaattaaaatagtcgatttt ggaagctcttgccagctaggccaaaggatttaccagtatatacaaagtcgattttaccgttcacccgaggtgttattggg cattccatatgatttagctatagatatgtggtcactgggctgtatactggtagaaatgcacaccggagaacctctcttcg caggatctaacgagtacaagcatccaggatctcggaagctccacgatgtgattggggcggagatgggcggaccagggggt cgacgagcaggagaacccggccattccgtggccgattatcttaaattcaaggaccttattttacgaatgttagaatttga tcctaaaacaaggatcactccatactatgcgcttcagcacaatttctttaagaagacgtcagacgaaagcacgaatacgc caaattctgcctccaattctcccgcaatagaacaacagggtgtctcctcaccaacggttgggtcgtcatccagtggcaga gcgaggtccgatcctacacaccaacaccactcacatctacacgtacattctcactccgcccaccaagggggagcactcta cccatccatggagtgtgaaagtcccgcttcccaggctcacaacaacgcgtcaagaactcagccaaattatacacagcagc aaagctggcctgagggtcaaggacaccctggtcaccacaacaacagtggtcaccaaggaaaccctccacatttacaatct tctcatagacatcattcgtcccatcgtcatgggtcatcgtcgggtgtggtccagtccccaccatcactaggggcaacagt gcctagtatggcagtgcctccacagaacatgttgttagggacggggtttgcaccgtcagacccattagtgtttacggacc ctgctgtggggatgcgttcgacgggggctatagacttaaccacagggttacctgtcactggtcaccctggtatgtatagt catcaacacgtacacacgtcacatggggagctagatagtgtaggacttaacgtgtctatacccacgtatcccccggggta tggccagcagtggcatggtccggggtttcctttctcgttaacggcgagttccgggtcgagtgaagtgccgacacagcatg ctaatagtatgacagaacgctcagaggacagtcctatgataggggtgtgtgtacagcagagtcctgtagcaagtcattga |
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Protein
| Protein ID | pfu_aug1.0_1248.1_36894.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1248.1_36894.t1 MFRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLATPELNVIHCDLKPENILLCNPKRSAIKIVDF GSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILVEMHTGEPLFAGSNEYKHPGSRKLHDVIGAEMGGPGG RRAGEPGHSVADYLKFKDLILRMLEFDPKTRITPYYALQHNFFKKTSDESTNTPNSASNSPAIEQQGVSSPTVGSSSSGR ARSDPTHQHHSHLHVHSHSAHQGGALYPSMECESPASQAHNNASRTQPNYTQQQSWPEGQGHPGHHNNSGHQGNPPHLQS SHRHHSSHRHGSSSGVVQSPPSLGATVPSMAVPPQNMLLGTGFAPSDPLVFTDPAVGMRSTGAIDLTTGLPVTGHPGMYS HQHVHTSHGELDSVGLNVSIPTYPPGYGQQWHGPGFPFSLTASSGSSEVPTQHANSMTERSEDSPMIGVCVQQSPVASH |
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