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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12486.1_03244
Locus scaffold12486.1 : 20046 ... 23577 : +
To GenomeBrowser scaffold12486.1:20046..23577
Genes list of scaffold scaffold12486.1
Synonym pfu_aug2.0_2082.1_08735

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_12486.1_03244.t1 2 1 zf-B_box 17 60 9.5e-14 51.0 3.9e-09 1.4e-05 24.8
pfu_aug1.0_12486.1_03244.t1 2 2 zf-B_box 73 109 9.5e-14 51.0 2.1e-11 7.9e-08 32.0

Transcript
Transcript IDpfu_aug1.0_12486.1_03244.t1
Definition-
>pfu_aug1.0_12486.1_03244.t1
atggcgtttgattcgtcaaggatagggacacaagaggcaataataaaaccgtgtgatttatgtgaagatgatgaaaacgt
aaactggttctgtagagattgtatccagaatctttgtgaaaactgcaagaaaactcaccttaagatcgcaacttgcaaaa
atcatcgactagtttcgattttagagggcgtcgtcattcagaagataaacgtttcaaacctttgtcatgaacacgatgaa
ccttttaccttcttttgtcgaaaatgcgcggagaacatttgttcaatatgtctttcattggtccataaaaagcatgagtt
tgtagatctacgtaatttacaatcggaattacaaatcaaactagaaaatgtcatcaaggacaaagaggatgaacgattgg
aaataagcaacaacaaagatgaatttgaaaaatatgcaaataaaagcaaggaaacgcttgaaaaaggctgtgctactata
gattatgcaatgaaagctttacataaagctgttgatgaagaaggtcaaaacctgaaagattttttaatagaaacaacaga
aaagcaaattacagaaatcgatgaacttacacaaaaacttgaaggaaagaagaatgagacgatccaaacagttaaacaag
aacttgcactacaaactgaatcaaattttaatcagttcgtcaaaacatctattgctaaacttcattctatacagcctttg
agatttcgtttcaactccgaggctgaatag

Protein
Protein IDpfu_aug1.0_12486.1_03244.t1
Definition-
>pfu_aug1.0_12486.1_03244.t1
MAFDSSRIGTQEAIIKPCDLCEDDENVNWFCRDCIQNLCENCKKTHLKIATCKNHRLVSILEGVVIQKINVSNLCHEHDE
PFTFFCRKCAENICSICLSLVHKKHEFVDLRNLQSELQIKLENVIKDKEDERLEISNNKDEFEKYANKSKETLEKGCATI
DYAMKALHKAVDEEGQNLKDFLIETTEKQITEIDELTQKLEGKKNETIQTVKQELALQTESNFNQFVKTSIAKLHSIQPL
RFRFNSEAE

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