Gene
| Gene Model ID | pfu_aug1.0_12488.1_46510 |
|---|---|
| Locus | scaffold12488.1 : 3943 ... 10835 : - |
| To GenomeBrowser | scaffold12488.1:3943..10835 |
| Genes list of scaffold | scaffold12488.1 |
| Synonym | pfu_aug2.0_106.1_20248 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12488.1_46510.t1 | 1 | 1 | ELFV_dehydrog_N | 3 | 89 | 1.5e-30 | 105.4 | 4.7e-34 | 2.3e-30 | 104.8 |
| pfu_aug1.0_12488.1_46510.t1 | 1 | 1 | ELFV_dehydrog | 110 | 247 | 3.1e-23 | 82.6 | 9.0e-27 | 4.5e-23 | 82.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12488.1_46510.t1 | gi|41282194|ref|NP_955839.2| | glutamate dehydrogenase 1b [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_12488.1_46510.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12488.1_46510.t1 atggatgtttgtgaggatgaggtgaaagccttagctgcattgatgacctataagtgtgcggtggtggatgtaccgtttgg tggggctaaagcaggagtgatgatcaatccacgagaatactcagaaagagagctggaaaaaatcacccgcagattcacct tggacatggcaagaaaaagtttcataggaccacaccttgatgtccctgcccctgacatgggtactggagaacgagaaatg gcctggattgctgatacatatgccaacactattggttctggagacatcaatgctcatgcctgtgtgaccggtaaaccaat tacacaaggagggatccacggtcgagtgtctgcaacaggaaggggagtttaccatggcattgagaactttattatggacg ctagctacatgagtatgattgggctgactccaggattcaaagacaagaccttcattctacagggctttggtaacgtggga ctgcactctatgaggtacctacacagagctggtgctgtatgtgttggagtgaaggagattgattgcagcatctacaataa acagggtattgatcctaaggaattggagaattataaactggagcatggaacaatcaaaggttttcccaatgcagagccat ttgagggggatctgttgatcgaacaatgtgatattctggtaccagcagctagtgaaagagtacttacatgtgacaacgca gctcaagttaaagcaaaggtcacagaggacgttttatga |
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Protein
| Protein ID | pfu_aug1.0_12488.1_46510.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12488.1_46510.t1 MDVCEDEVKALAALMTYKCAVVDVPFGGAKAGVMINPREYSERELEKITRRFTLDMARKSFIGPHLDVPAPDMGTGEREM AWIADTYANTIGSGDINAHACVTGKPITQGGIHGRVSATGRGVYHGIENFIMDASYMSMIGLTPGFKDKTFILQGFGNVG LHSMRYLHRAGAVCVGVKEIDCSIYNKQGIDPKELENYKLEHGTIKGFPNAEPFEGDLLIEQCDILVPAASERVLTCDNA AQVKAKVTEDVL |
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