Gene
| Gene Model ID | pfu_aug1.0_12501.1_32214 |
|---|---|
| Locus | scaffold12501.1 : 7275 ... 14754 : - |
| To GenomeBrowser | scaffold12501.1:7275..14754 |
| Genes list of scaffold | scaffold12501.1 |
| Synonym | pfu_aug2.0_2420.1_02125 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12501.1_32214.t1 | 2 | 1 | Fibrinogen_C | 42 | 108 | 0.0 | 177.2 | 0.24 | 890.0 | -0.8 |
| pfu_aug1.0_12501.1_32214.t1 | 2 | 2 | Fibrinogen_C | 110 | 304 | 0.0 | 177.2 | 0.0 | 0.0 | 176.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12501.1_32214.t1 | gi|115738358|ref|XP_785073.2| | 3.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_12501.1_32214.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12501.1_32214.t1 gtgtgatactggaactgatgacaattcgattgtcaaatttgttcaattgaatattcaggattcactgagctcattgcaaa aacagcttcactacgaaacatcaacacgtctccagtttgataaagatttgactgagatgttgaggctatatagggctatg agtggtgaaatagaaaggatttcaaaggaaaacattgaactgaaacaggacttaatttctctcttgaatacaacagccaa tactgatatccttagcagtcaaattcaatttttgaataagactatgacatcagccttagtaaacataactaaaatccaaa cggaaaagccagcagattgtaaggagattctaagttctgaacccaactcgagatccggagtgtacatcatttatcctgat ggaacagttggatattcagtatattgtgatatgacatcacaaggcgggggatggacggtcattcaaaggagaataaacgg tatattggattttgataagacttggaaagaatacaaagacggctttggggatctcaatagcgagcactggataggaaatg atgtgattcatcgattagcaaagagaagtagaacactccttgtacgagttctgagtaaggagagtggatcaacatggaag tatgctatgtatagtgacttgcacgttggcgatgaaacctcaaactacagattgacatttagacaaggcagctattctgg aaatgcaggagacggccttaacaaggacggctatggagataacaacaacatgatgttctccaccaaggatagggacaacg accaatgggataaattatgtgcaaatcaccataaaggaggctggtggtttaagaagtgtgaatatggatgtctgaactgt aaatacctgggtagtgacagtacctgggacgcaattcaatacaaatccacatggatgatgatcagataa |
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Protein
| Protein ID | pfu_aug1.0_12501.1_32214.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12501.1_32214.t1 CDTGTDDNSIVKFVQLNIQDSLSSLQKQLHYETSTRLQFDKDLTEMLRLYRAMSGEIERISKENIELKQDLISLLNTTAN TDILSSQIQFLNKTMTSALVNITKIQTEKPADCKEILSSEPNSRSGVYIIYPDGTVGYSVYCDMTSQGGGWTVIQRRING ILDFDKTWKEYKDGFGDLNSEHWIGNDVIHRLAKRSRTLLVRVLSKESGSTWKYAMYSDLHVGDETSNYRLTFRQGSYSG NAGDGLNKDGYGDNNNMMFSTKDRDNDQWDKLCANHHKGGWWFKKCEYGCLNCKYLGSDSTWDAIQYKSTWMMIR |
|