Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12510.1_68511
Locus scaffold12510.1 : 4439 ... 14305 : -
To GenomeBrowser scaffold12510.1:4439..14305
Genes list of scaffold scaffold12510.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_12510.1_68511.t1 gi|56404379|sp|Q6QLW4.1|CYC_PECGU Cytochrome c 2.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
adductorMuscle 1
maleGonad 1
mantle 1
mantleEdge 1
mantlePallium 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_12510.1_68511.t1
Definition-
>pfu_aug1.0_12510.1_68511.t1
atgacctttgaccggcgaaattatgaaacgaatgtgacgtgtacatgcaccgacttgattgatatcgccataactcaagt
tgtgaaacaagaactcatgggcatcacatggggcaaagataccctctgggtttacctagaaaatccaaagaagtacatcc
caggaacaaaaatggtgtttgccggacttaaaaagccgaaagagcgagccgatcttatagcttatctagaggaatccaca
gccaaatga

Protein
Protein IDpfu_aug1.0_12510.1_68511.t1
Definition-
>pfu_aug1.0_12510.1_68511.t1
MTFDRRNYETNVTCTCTDLIDIAITQVVKQELMGITWGKDTLWVYLENPKKYIPGTKMVFAGLKKPKERADLIAYLEEST
AK

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