Gene
| Gene Model ID | pfu_aug1.0_12518.1_32220 |
|---|---|
| Locus | scaffold12518.1 : 6195 ... 14744 : - |
| To GenomeBrowser | scaffold12518.1:6195..14744 |
| Genes list of scaffold | scaffold12518.1 |
| Synonym | pfu_aug2.0_904.1_14644 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12518.1_32220.t1 | 1 | 1 | RVT_1 | 112 | 188 | 3.7e-08 | 32.9 | 3.0e-12 | 4.4e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12518.1_32220.t1 | gi|115688831|ref|XP_001180325.1| | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_12518.1_32220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12518.1_32220.t1 ggaaaaattggagagaaacattgtggttgacagagaaatcgaggaaagatgtcatgaatacttccgtaaatttgaaaagc gtatcaagcacattgagagcctagttaagagtaagccagatatggaagaggtgcaagccatgacagacagaaccaagcta actgacacgccctgcgtcggaaattctgatgcaggcaatcaggaagcaattgagaatttaaacaaatacaaagagagtgt ctcacgaaggaataacataattattttcaaagcaccagagtctaaatcagaaaacccagaattaaggaaacaagaggata aagaaattgtacaacagctttgcgaagggagtgtggtcgggccgatcatgtttgtactctacatccatgacatgccggac atcgttgaagctacaacatatctatttgcagatgataccaagatatatcaacaaactaaaagtaaccagaacaagacacg ccttatagaggatcttgacgctccgcaaaaatggtcagatacctggttattgaaatttcatccaaataaatgtaaagtgg tatccatatctacaaatgggtcgaaatcataa |
|
Protein
| Protein ID | pfu_aug1.0_12518.1_32220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12518.1_32220.t1 EKLERNIVVDREIEERCHEYFRKFEKRIKHIESLVKSKPDMEEVQAMTDRTKLTDTPCVGNSDAGNQEAIENLNKYKESV SRRNNIIIFKAPESKSENPELRKQEDKEIVQQLCEGSVVGPIMFVLYIHDMPDIVEATTYLFADDTKIYQQTKSNQNKTR LIEDLDAPQKWSDTWLLKFHPNKCKVVSISTNGSKS |
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