Gene
| Gene Model ID | pfu_aug1.0_12519.1_39346 |
|---|---|
| Locus | scaffold12519.1 : 13 ... 8408 : + |
| To GenomeBrowser | scaffold12519.1:13..8408 |
| Genes list of scaffold | scaffold12519.1 |
| Synonym | pfu_aug2.0_49.1_30083 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12519.1_39346.t1 | 11 | 1 | zf-H2C2_2 | 339 | 359 | 1.8e-27 | 94.2 | 0.0037 | 11.0 | 6.5 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 1 | zf-C2H2 | 349 | 372 | 2.1e-24 | 84.3 | 1.7e-05 | 0.05 | 13.9 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 1 | zf-C2H2_4 | 349 | 370 | 2.7e-12 | 46.0 | 0.00034 | 1.0 | 9.8 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 2 | zf-H2C2_2 | 475 | 487 | 1.8e-27 | 94.2 | 0.0023 | 6.7 | 7.2 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 2 | zf-C2H2 | 478 | 500 | 2.1e-24 | 84.3 | 7.3e-05 | 0.22 | 11.9 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 2 | zf-C2H2_4 | 478 | 500 | 2.7e-12 | 46.0 | 0.0073 | 22.0 | 5.6 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 3 | zf-H2C2_2 | 492 | 517 | 1.8e-27 | 94.2 | 0.00073 | 2.2 | 8.7 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 3 | zf-C2H2 | 506 | 528 | 2.1e-24 | 84.3 | 0.00012 | 0.37 | 11.2 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 3 | zf-C2H2_4 | 506 | 528 | 2.7e-12 | 46.0 | 5.1e-05 | 0.15 | 12.4 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 4 | zf-H2C2_2 | 521 | 543 | 1.8e-27 | 94.2 | 2.9e-06 | 0.0085 | 16.3 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 4 | zf-C2H2 | 534 | 556 | 2.1e-24 | 84.3 | 0.00016 | 0.46 | 10.9 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 4 | zf-C2H2_4 | 534 | 556 | 2.7e-12 | 46.0 | 0.0017 | 5.0 | 7.6 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 5 | zf-H2C2_2 | 549 | 573 | 1.8e-27 | 94.2 | 6.7e-05 | 0.2 | 12.0 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 5 | zf-C2H2 | 562 | 584 | 2.1e-24 | 84.3 | 5.7e-07 | 0.0017 | 18.5 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 5 | zf-C2H2_4 | 563 | 584 | 2.7e-12 | 46.0 | 4.2e-05 | 0.12 | 12.7 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 6 | zf-H2C2_2 | 576 | 598 | 1.8e-27 | 94.2 | 9.6e-11 | 2.9e-07 | 30.4 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 6 | zf-C2H2 | 590 | 598 | 2.1e-24 | 84.3 | 0.065 | 190.0 | 2.6 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 6 | zf-C2H2_4 | 590 | 597 | 2.7e-12 | 46.0 | 0.59 | 1700.0 | -0.3 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 7 | zf-H2C2_2 | 599 | 612 | 1.8e-27 | 94.2 | 0.019 | 58.0 | 4.2 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 7 | zf-C2H2 | 603 | 626 | 2.1e-24 | 84.3 | 1.8e-05 | 0.053 | 13.8 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 7 | zf-C2H2_4 | 603 | 626 | 2.7e-12 | 46.0 | 8.4e-06 | 0.025 | 14.8 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 8 | zf-H2C2_2 | 626 | 650 | 1.8e-27 | 94.2 | 0.00038 | 1.1 | 9.6 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 8 | zf-C2H2 | 640 | 662 | 2.1e-24 | 84.3 | 2.0e-05 | 0.058 | 13.7 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 8 | zf-C2H2_4 | 640 | 662 | 2.7e-12 | 46.0 | 0.00047 | 1.4 | 9.4 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 9 | zf-H2C2_2 | 654 | 678 | 1.8e-27 | 94.2 | 6.9e-12 | 2.0e-08 | 34.0 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 9 | zf-C2H2 | 668 | 690 | 2.1e-24 | 84.3 | 7.8e-08 | 0.00023 | 21.3 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 9 | zf-C2H2_4 | 668 | 690 | 2.7e-12 | 46.0 | 3.1e-05 | 0.091 | 13.1 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 10 | zf-H2C2_2 | 685 | 706 | 1.8e-27 | 94.2 | 3.5e-05 | 0.11 | 12.8 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 10 | zf-C2H2 | 696 | 718 | 2.1e-24 | 84.3 | 3.8e-06 | 0.011 | 16.0 |
| pfu_aug1.0_12519.1_39346.t1 | 10 | 10 | zf-C2H2_4 | 696 | 717 | 2.7e-12 | 46.0 | 0.0087 | 26.0 | 5.4 |
| pfu_aug1.0_12519.1_39346.t1 | 11 | 11 | zf-H2C2_2 | 710 | 722 | 1.8e-27 | 94.2 | 0.15 | 440.0 | 1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12519.1_39346.t1 | gi|334313416|ref|XP_001377149.2| | 5.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12519.1_39346.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12519.1_39346.t1 atgacattcgacgaattactcagagcagtgaaaagagcatacgatcaatctgatgctcaaggtcacacaagcattccttg tccagatgtcagagatcttttatttctgttgcacactgtacttgataacaattacttcgaatctaatgatataatttaca aacaaacaataggcgcagcgatgggcgcggtgccaagtccagaaatttgtgacataagaatgtttgaaattacacaagaa attacagataattttatacatagaaataaaattatctaccatggtcgctatatagacgacggcattatcctatttgaagg aaataaggaagaaatagaaaacttcttctcgataggaaatgctctgcataaattacttaagtttacataccagatttctg actcaagtattgtttttctagatacagaactttacaaaggaaagcgcttcatagaaactggtatccttgatattaagtca tatgtaaagcctaccaataattttcactatttacacagaaatagtgcccacagtccgtcagtcttaagaggcttcatgaa agacaactctggccacacaagtaatgatgaagtagaagcagaggtcaaggtcatggataaaaagataaatcgtaaggaaa gaaaaccaccaatgaaaggaaagagaccaagacgcagaaagaaaactcatcttagcaatccagttaaaaggcataggatt aggaaaaaagttgacgtgaaggggactgaagtgaaagcagaaattaagaattctatgatcaaatgtaaacagagagagaa agctgaatctggttatattgaaatagaagataagaaactcaattctatatctcagattaaggtagaggcttgtggcagtg attctgtctctgttcacctacagaagaatgccgatatcaataccgacattagtaaacatgaagaagatattaaggaggag gagtgtttagacaatagtgaaaatggcctccaagggaaaggtgagttagatggtcatgtagaaaaacatacaattactct tacctataaatgtcacaagtgtgataaagtatgcagcagttctgaggaataccaaaaacatgttgaaaaatactgcccag tgattgtgaaaccttcatcaagtcagaatagtaacgacaccaaggactctctgttgaatcataaaccatgtgaccagcag gtggaagggaacgaaggtacggacagctcacataatgaattaaagacatcacaaggggaggagaagtctcatattgttga agtaacagattctgcagatgatgaaggtaaaaaggtagataaccagcaaactaaatcagtggatgatgaaaacaaagaaa tgattagtgaaaccgacaatgataaagaaaaacagaacatagtgttcaagcatagccgtgacccagagggtcatacatgt gataagtgtggaagaacgtttcaatttgcgatggctctttacaaacataaacttttacatgatgacaatggtatgttccc ttgtcgattctgccatctcacgttcgaaactagcgagaagctaaccagacattccatcgttcacagagctgtcaagccgt atgtttgtacgagttgtaaggcaggattcatggagccggagcagctagaggagcacgtgaagaaacataaacgaggacgg acgtttatgtgtgaggagtgtggtaaatgttacgctacgaacttgagccttcgaactcatatgagaaatcatacaggtgt acgtccgtataaatgtaaatactgcgataagagtgaaaagaaagaatataaatgttccaagtgtgggaaggagtgtcgct ccaatgctgcattaaggacacattatgtatcgatgcacctgacccaagaggaagctaaaacattcaaacacaccatccat gaatgtaaagtatgtcataaatactttgttgataagcatgacttgagggcccatttgggagttcatacaggagagaagcc attttcctgttcatactgtggcaaggcattttcagacaagagtaacaagacgcagcatgaaaaaactcactggaaagtca aacctttttcttgtaatgagtgtggaaaaggcttcgtgcttcagcgggatttgttacgacactccaaaattcatcagaca ggagagtccatgcttcttcatcctgtaataccgaaaaggaaaagaggaagacctgcagaacagttaggtactttacaaaa tgtagaatcggaggaagatcgtaggcagcgagagatcaaagttcagattgatcacctgaccagtaaggaggcggggcttc atgttcctgtcagtgataatatatcacatcagtacgtcatggctgatggatatttacatgtatctaattctcaaagtttt gttgaacaagaagttatatatgacagtgctcagaataactcaaactttaatatcctcattttgtaa |
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Protein
| Protein ID | pfu_aug1.0_12519.1_39346.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12519.1_39346.t1 MTFDELLRAVKRAYDQSDAQGHTSIPCPDVRDLLFLLHTVLDNNYFESNDIIYKQTIGAAMGAVPSPEICDIRMFEITQE ITDNFIHRNKIIYHGRYIDDGIILFEGNKEEIENFFSIGNALHKLLKFTYQISDSSIVFLDTELYKGKRFIETGILDIKS YVKPTNNFHYLHRNSAHSPSVLRGFMKDNSGHTSNDEVEAEVKVMDKKINRKERKPPMKGKRPRRRKKTHLSNPVKRHRI RKKVDVKGTEVKAEIKNSMIKCKQREKAESGYIEIEDKKLNSISQIKVEACGSDSVSVHLQKNADINTDISKHEEDIKEE ECLDNSENGLQGKGELDGHVEKHTITLTYKCHKCDKVCSSSEEYQKHVEKYCPVIVKPSSSQNSNDTKDSLLNHKPCDQQ VEGNEGTDSSHNELKTSQGEEKSHIVEVTDSADDEGKKVDNQQTKSVDDENKEMISETDNDKEKQNIVFKHSRDPEGHTC DKCGRTFQFAMALYKHKLLHDDNGMFPCRFCHLTFETSEKLTRHSIVHRAVKPYVCTSCKAGFMEPEQLEEHVKKHKRGR TFMCEECGKCYATNLSLRTHMRNHTGVRPYKCKYCDKSEKKEYKCSKCGKECRSNAALRTHYVSMHLTQEEAKTFKHTIH ECKVCHKYFVDKHDLRAHLGVHTGEKPFSCSYCGKAFSDKSNKTQHEKTHWKVKPFSCNECGKGFVLQRDLLRHSKIHQT GESMLLHPVIPKRKRGRPAEQLGTLQNVESEEDRRQREIKVQIDHLTSKEAGLHVPVSDNISHQYVMADGYLHVSNSQSF VEQEVIYDSAQNNSNFNILIL |
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