Gene
| Gene Model ID | pfu_aug1.0_12519.1_39348 |
|---|---|
| Locus | scaffold12519.1 : 14576 ... 20933 : + |
| To GenomeBrowser | scaffold12519.1:14576..20933 |
| Genes list of scaffold | scaffold12519.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12519.1_39348.t1 | 3 | 1 | Aminotran_5 | 10 | 43 | 2.8e-11 | 42.7 | 9.1e-05 | 1.4 | 7.6 |
| pfu_aug1.0_12519.1_39348.t1 | 3 | 2 | Aminotran_5 | 45 | 94 | 2.8e-11 | 42.7 | 4.0e-11 | 6.0e-07 | 28.5 |
| pfu_aug1.0_12519.1_39348.t1 | 3 | 3 | Aminotran_5 | 117 | 173 | 2.8e-11 | 42.7 | 0.0011 | 16.0 | 4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12519.1_39348.t1 | gi|291233292|ref|XP_002736589.1| | 6.0e-34 |
Transcript
| Transcript ID | pfu_aug1.0_12519.1_39348.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12519.1_39348.t1 atgaactcccatccagataaatggtttcggagagaggtggagccactgtacagggaggctaccaaagtggcagcggagtt tgtaggatgtgactcgcaggaccttgtcttcgtccaaaatgttactactgatcatataacatgccccacgtccattgttc ttcctgtgaagagaattgccgccctctgccgagagaatggaatactaagtctaatagatggcgctcatgctccaggtcaa cttgaccttaatatcgatgacctaggcgtcgacttttacactggtattgtgcatattccgaagcaccatgattggataaa gccactagtgacgtcacataattaccagagaggtccttactgggaatttggataccagggtacaagggacgatacacctt acactgttgttccaaaagcggtggagttttataaaaagatgggtggtttaagtcgaattcgagaatacaattctagctta ctagacaaggctgttgaaatgctgtgctcgtcatttgatctcagacggttccccataccaaaatccatggaggcaccgta catgaggcttcttatactacctaaagtccccggatatgggacaacggaagtaagcattgaaaggatcattttcctggttc tttttaaaggccgacgttgggaaccacccggtcgtcaatag |
|
Protein
| Protein ID | pfu_aug1.0_12519.1_39348.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12519.1_39348.t1 MNSHPDKWFRREVEPLYREATKVAAEFVGCDSQDLVFVQNVTTDHITCPTSIVLPVKRIAALCRENGILSLIDGAHAPGQ LDLNIDDLGVDFYTGIVHIPKHHDWIKPLVTSHNYQRGPYWEFGYQGTRDDTPYTVVPKAVEFYKKMGGLSRIREYNSSL LDKAVEMLCSSFDLRRFPIPKSMEAPYMRLLILPKVPGYGTTEVSIERIIFLVLFKGRRWEPPGRQ |
|