Gene
| Gene Model ID | pfu_aug1.0_12547.1_68517 |
|---|---|
| Locus | scaffold12547.1 : 25920 ... 33139 : - |
| To GenomeBrowser | scaffold12547.1:25920..33139 |
| Genes list of scaffold | scaffold12547.1 |
| Synonym | pfu_aug2.0_162.1_07072 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12547.1_68517.t1 | 1 | 1 | SHQ1 | 1 | 120 | 6.0e-40 | 136.7 | 2.20004e-43 | 8.0e-40 | 136.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12547.1_68517.t1 | gi|307180275|gb|EFN68308.1| | Protein SHQ1-like protein [Camponotus floridanus] | 7.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_12547.1_68517.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12547.1_68517.t1 gtagaatcagcatggaccgtttgtaaactgagctcaactttatcttggctagagagttttgaagacttggaagcagttgc ctcaagtttcatgaggagaagtctctgctatcctttgtacagaaactggaatctctccatgaaggtgttacaagacacag ctcatttactttgcagagggaaacaaacaatactaaggatcctactggagatacattcgttgttcagtgagagttaccca cgttacatactgaatgacctctatgtcaaagactacagtgtttggattcaaactacaagcaatgacagattgaaatccct aggtactgcatttgaaaagatctcgctacagaagtctgaggtggggtttgatctgtgtgcgttagaacaattaaccatag atgatgatgcttccttatcaacagcaatggcatcagtcaaaatacatattgctgaaacagacagtgatgacagtggtgat gaagatagtgatgatgaagatgatagtagtgatgaagatgacagttcagaaagtgatgccaaaaaatgtagtgttagtga tgggcagaaatctagtgctggcaaatctgataatgattga |
|
Protein
| Protein ID | pfu_aug1.0_12547.1_68517.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12547.1_68517.t1 VESAWTVCKLSSTLSWLESFEDLEAVASSFMRRSLCYPLYRNWNLSMKVLQDTAHLLCRGKQTILRILLEIHSLFSESYP RYILNDLYVKDYSVWIQTTSNDRLKSLGTAFEKISLQKSEVGFDLCALEQLTIDDDASLSTAMASVKIHIAETDSDDSGD EDSDDEDDSSDEDDSSESDAKKCSVSDGQKSSAGKSDND |
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