Gene
Gene Model ID | pfu_aug1.0_1255.1_07853 |
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Locus | scaffold1255.1 : 8546 ... 14095 : - |
To GenomeBrowser | scaffold1255.1:8546..14095 |
Genes list of scaffold | scaffold1255.1 |
Synonym | pfu_aug2.0_1032.1_08112 |
Manual annotation
Study field | Environmental Response |
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Gene name | g-protein coupled receptor |
Description | similar (28%) to ABG36516.1| G protein-coupled receptor [Perna canaliculus |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1255.1_07853.t1 | 1 | 1 | 7TM_GPCR_Srsx | 40 | 309 | 1.1e-12 | 47.7 | 3.7e-16 | 1.4e-12 | 47.3 |
pfu_aug1.0_1255.1_07853.t1 | 1 | 1 | 7tm_1 | 45 | 296 | 3.9e-32 | 111.3 | 1.3e-35 | 4.8e-32 | 111.1 |
Transcript
Transcript ID | pfu_aug1.0_1255.1_07853.t1 |
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Definition | - |
>pfu_aug1.0_1255.1_07853.t1 atggcactggacaactcctccttgggttatacggaagaccccctgaataccactgccagcctcttaacaactgagagacg taatgtggtttttggcgacatgttcttggttgctgcatgtcttgggggtttcggaaatggctttgttctctttgtctact tcaaatcatcccaactcactgatatcacgatgaagctgatcatgaatcttgccctcaccgaccttatcactgccatttct cttggcatgacttttctggcagtcagatcgagcctgattgtagtctcctatctgaattgcctgatattcatgattgttcc caattacatgttcttcgtctctcagtcagttctggtcattaacaccctggaccgatacatagctatctgccattacgcaa agtacgccgaaatgatgacaagaaaagcactaaatataatgcttgctgtcgcatggatttacccaatatttctactcagc attccatttttcggattcaattattgggaggaggtccatgcctgtctttggaggaatcttctacatgaatgggtatacat tactttatcgtctgtcattatcactctcatgtccatttctgctttcttctacgtcttgatcatgaagaaggcctgggaat tttacaggagattcttgccaacccatactaaaggaacagaagaggaaatggaaaggattcgagccaaaaaacgggcaatc aataaaggaaaggccatgggagttatcacgttgtttttcacaatttgctggctgccttcgcatatacttcagtttaactt tggggtaaatcatcaaggtaacgatactcttattggcattacccttttcatgggtacattgaattgtatcgtgaatccat tcgtttatgcatggcagaaaaaggactttcgcacggaggccaagaaaatagtgcgatgtagaaggcccaagcagcgagga ccaaaggatccaacgatgaaaaaggaacacgccattcagtccgagaagacagagaaactcacctcaaaaggctcgaaaga acagatacaagtttaa |
Protein
Protein ID | pfu_aug1.0_1255.1_07853.t1 |
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Definition | - |
>pfu_aug1.0_1255.1_07853.t1 MALDNSSLGYTEDPLNTTASLLTTERRNVVFGDMFLVAACLGGFGNGFVLFVYFKSSQLTDITMKLIMNLALTDLITAIS LGMTFLAVRSSLIVVSYLNCLIFMIVPNYMFFVSQSVLVINTLDRYIAICHYAKYAEMMTRKALNIMLAVAWIYPIFLLS IPFFGFNYWEEVHACLWRNLLHEWVYITLSSVIITLMSISAFFYVLIMKKAWEFYRRFLPTHTKGTEEEMERIRAKKRAI NKGKAMGVITLFFTICWLPSHILQFNFGVNHQGNDTLIGITLFMGTLNCIVNPFVYAWQKKDFRTEAKKIVRCRRPKQRG PKDPTMKKEHAIQSEKTEKLTSKGSKEQIQV |