Gene
| Gene Model ID | pfu_aug1.0_12551.1_17875 |
|---|---|
| Locus | scaffold12551.1 : 10786 ... 24742 : - |
| To GenomeBrowser | scaffold12551.1:10786..24742 |
| Genes list of scaffold | scaffold12551.1 |
| Synonym | pfu_aug2.0_127.1_23529 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12551.1_17875.t1 | 1 | 1 | Trichoplein | 1 | 156 | 8.9e-12 | 44.0 | 7.6e-16 | 1.1e-11 | 43.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12551.1_17875.t1 | gi|296434259|ref|NP_001171797.1| | coiled-coil domain-containing protein 11-like [Saccoglossus kowalevskii] | 4.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12551.1_17875.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12551.1_17875.t1 cgagagttaagagaggaggacaagcgatatcgtgcgtacctaaaacagttgatggaggaagaacgtgtgaaggagcgtga tctggaacgattggtcaatgaagaagtggagaagatgtggcaaaaacgtctacatcaatggcagctagagcggcaagcca ggaagaagttactagaggatgtattggtggtcagagcacagcaaatacgggatagattacaaaggaatgaggtcagacag agagaagctgaaaaagagagaattgaactgatagataccatcgagagaaaccgtgcattagaggaacaacaggcgtacaa aatgtgggaaaagaacgccacctatcagagagatttggaaggacagattgagtataatcgtaaactacgtgagctggagc gtcatagagaagaagaggaattcttactgggaatgcaggcggagaaagaataccaactaagactgaaagattgtttggat aactccgagtacgacaaactacaccccatgaggcgtgccgctcaaaatagggctcaagtacagtaa |
|
Protein
| Protein ID | pfu_aug1.0_12551.1_17875.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12551.1_17875.t1 RELREEDKRYRAYLKQLMEEERVKERDLERLVNEEVEKMWQKRLHQWQLERQARKKLLEDVLVVRAQQIRDRLQRNEVRQ REAEKERIELIDTIERNRALEEQQAYKMWEKNATYQRDLEGQIEYNRKLRELERHREEEEFLLGMQAEKEYQLRLKDCLD NSEYDKLHPMRRAAQNRAQVQ |
|