Gene
| Gene Model ID | pfu_aug1.0_12596.1_25051 |
|---|---|
| Locus | scaffold12596.1 : 12606 ... 28799 : + |
| To GenomeBrowser | scaffold12596.1:12606..28799 |
| Genes list of scaffold | scaffold12596.1 |
| Synonym | pfu_aug2.0_2734.1_15609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12596.1_25051.t1 | 2 | 1 | EF-hand_7 | 14 | 62 | 3.2e-16 | 59.2 | 1.0e-06 | 0.0013 | 18.8 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 1 | EF-hand_1 | 14 | 26 | 3.0e-11 | 41.7 | 0.95 | 1200.0 | -0.8 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 1 | EF-hand_6 | 14 | 28 | 1.2e-10 | 40.3 | 0.056 | 69.0 | 3.7 |
| pfu_aug1.0_12596.1_25051.t1 | 3 | 1 | EF-hand_8 | 18 | 59 | 1.5e-13 | 50.1 | 0.00057 | 0.71 | 9.5 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 2 | EF-hand_1 | 49 | 63 | 3.0e-11 | 41.7 | 5.1e-06 | 0.0063 | 15.7 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 2 | EF-hand_6 | 49 | 63 | 1.2e-10 | 40.3 | 0.00037 | 0.46 | 10.5 |
| pfu_aug1.0_12596.1_25051.t1 | 3 | 2 | EF-hand_8 | 50 | 93 | 1.5e-13 | 50.1 | 5.8e-08 | 7.2e-05 | 22.3 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 3 | EF-hand_1 | 76 | 103 | 3.0e-11 | 41.7 | 2.6e-08 | 3.2e-05 | 22.9 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 3 | EF-hand_6 | 77 | 103 | 1.2e-10 | 40.3 | 5.7e-08 | 7.1e-05 | 22.3 |
| pfu_aug1.0_12596.1_25051.t1 | 2 | 2 | EF-hand_7 | 79 | 132 | 3.2e-16 | 59.2 | 7.2e-14 | 8.8e-11 | 41.7 |
| pfu_aug1.0_12596.1_25051.t1 | 3 | 3 | EF-hand_8 | 96 | 132 | 1.5e-13 | 50.1 | 5.6e-10 | 7.0e-07 | 28.7 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 4 | EF-hand_1 | 112 | 133 | 3.0e-11 | 41.7 | 0.0023 | 2.9 | 7.4 |
| pfu_aug1.0_12596.1_25051.t1 | 4 | 4 | EF-hand_6 | 125 | 134 | 1.2e-10 | 40.3 | 0.25 | 310.0 | 1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12596.1_25051.t1 | gi|225024|prf||1206346A | calmodulin | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_12596.1_25051.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12596.1_25051.t1 atgttatcagaagagcagaaagaaggcgaagagaaagagaaaatcaaaatagaggaactagggaatgtgttacgtgcatt gggacaggctcctacagaggcggaactaagcaagatgctcagtgacttaaattctgaaggcgatgattctgatgggaaaa tcgattttgaagaattccttaacattgctgctcaaaagatgaggagagaagacgacagagaggatgaactagtaaatgct tttaaaatgttagacaaaaacggagagggttacataatgggtaaagagctacgtaatataatgacaactatcggcgaaaa actatctgaggaagaagtggaggagatgatcaaagaagctgaaatgggagaagatggtagaattagttatgaagattgta gattaaaattttctggttccatcgataccaaacttgtagaaatccgtcaagaaacaagcgaattagagaagtttgaagac cgaaaccgcactcggtactatttgaaccagtattga |
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Protein
| Protein ID | pfu_aug1.0_12596.1_25051.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12596.1_25051.t1 MLSEEQKEGEEKEKIKIEELGNVLRALGQAPTEAELSKMLSDLNSEGDDSDGKIDFEEFLNIAAQKMRREDDREDELVNA FKMLDKNGEGYIMGKELRNIMTTIGEKLSEEEVEEMIKEAEMGEDGRISYEDCRLKFSGSIDTKLVEIRQETSELEKFED RNRTRYYLNQY |
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