Gene
| Gene Model ID | pfu_aug1.0_12603.1_17881 |
|---|---|
| Locus | scaffold12603.1 : 20996 ... 30661 : + |
| To GenomeBrowser | scaffold12603.1:20996..30661 |
| Genes list of scaffold | scaffold12603.1 |
| Synonym | pfu_aug2.0_5905.1_19476 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12603.1_17881.t1 | 1 | 1 | rve | 474 | 578 | 1.2e-16 | 60.8 | 8.2e-20 | 3.0e-16 | 59.5 |
| pfu_aug1.0_12603.1_17881.t1 | 1 | 1 | Fibrinogen_C | 736 | 905 | 0.0 | 163.6 | 0.0 | 0.0 | 162.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_12603.1_17881.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12603.1_17881.t1 atgaatcagatatcaccatatcctgagaaaattatttggttgtataaacgatggcagcctctctatgacgaaatcaaagc tacggtgtttccccgagtcgagttcattcaaggcattcccttggatattgaacaggatacttttattcatcctagcaagc gaaacttggtcattttagatgatcttatgtcatcgtcggccaaagaccctcgaatcaatgagttatatacagagggtagt catcacaggaatttgtcggtgattgccttgaaccaaaacttgtacttcaacaaggatcccacccagagaaggaattgtca ttatttggttatgtttaataatccagtcgaccaacaacagatcatgacattggccaggcagatgtatccagggaatcctc aacatctcatgcgtcattttaaggatgctacctcaaggccttatgggtatttggtcattgacctgaaacctttcacgacc gaacatcaacgcctacgcacagatatatttgaccaatcggatgatcagaaggacccaacatgtcgattcgaagaccacat ggatcagataaataaagatgatcaaaaggacatagatcattctgaacacatctctgctaccgatcggacgtgttttgaag aagagaaaatgcattcctgtgacgattgtggtctcgtctttgaaaacatacacgatttacaaaggcatgtcaaaacatgg tgtccagaaaacagaagaagaaagcatgacgaagacgatgaaataatccacaagaagatgagattagacgatgtcgcatc cgaagaagacgatgactcagtcgaagacgatgatgatggatttgatttcatcgttaatgaagtttgggacgatcacagca cccaatacgatagaaaaatcaagcaactcatggcagatgacatgtcgaagaaggatgccaaagaggaggctagcgatatc atgttatccaaagaccgatcccttttcatgaggaaatataaagattttctcatgcatatgcatgaattaaatgctagcag actccacaggatgatcaaacaggagataacagaattggttgcagagaaggacgtgcatatagaccaggccatggaacaag tgatcaaacgtcacagaactgattttgactcccttttcgaaaactacgatgagagtgatgacgaaggtgacagcgaagat gatatggataccgaagacaatatcaatgcaggaagtttctccggaccggataaattatatcgctatgtcaagaaggcggg gaaatacgtcatcagcaaatacagaatccggaaatggttacaaagacaggagccctatagcttacagagacctcttgtca gaaagtttaagagaaacactgtgatcaccttaggtatcgacgatcaatgggatgccgacctaatggatatgaccaagttt gcgaaagagaacgacggatatgcctacatcctcgtagtcatcgatatattttcaaaatatctatggctaaggcccacact ggataaacgaggagagagtatcacggctgcctttcaaacgatactggaagaggggagacaaccaaccagaattcgtacag ataaaggccaagaattcaaatcaaggagttttaataccctccttaaaagaaacaacatcgaacatctttatgcacagaat acagaaataaaagccaactatgcagaaagagtcatcaagaccgtcaaagccaaaatatatcggtacatgacgtataagca atcgcagcgctatgttgatcgtttgaaagacttcaatatcaactataactctacattccatcgtaccatcggcatggctc ccgacaaagtcaatgaatccaaggaaacaaatctttggtggaaaatgtattggcctaaaaagcctttggacgcagggaaa cggaaacaaacgagaaaaccgtttaaattcaaagttggcgatcgagtgagggtgactcatatacggaatccttttacccg ggaatacgatcaaaagtggtctggagaattattcatcattgccgatagacgaataagaggtggaatccccgtttacaaac tcaaagactatttggaggaagatatcattggcaccttttatcaacccgaactgcagaaagtggataccagagaagatgac gtgtttaaaatagagacaatcatcaagacgaaaggacgtggaagaaataaacaatatctcgtgtttcaaagacggaaaga cggctccgttgatttttacagaccatggaaagaatacaaggaaggattcggctctactaggggagaatattggctaggaa attcagcaatacatgaactgacacaaaaaggttcgtgtgaattgagaatagatatgacaaactggcaaggtacaacagga tatgctaaatatggcagcttcaaacttgagaacgaagcaaatggatttcaactcagaatcggaaaatacactggaaatgc aggtaaggacagtctggcttaccacaacaacatgaaattttccaccaaggacgtagacaatgataattatgcaaagggta actgtgcggtcatttgcaccggagcatggtgggataatgcctgtaatgaaagtggactgaatggtaactataaagtcact aactcagatttgggagtggaatgggacggatttccgaacgggaagttcatgaagagcacaaagatgatgttcagatgtaa ataa |
|
Protein
| Protein ID | pfu_aug1.0_12603.1_17881.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12603.1_17881.t1 MNQISPYPEKIIWLYKRWQPLYDEIKATVFPRVEFIQGIPLDIEQDTFIHPSKRNLVILDDLMSSSAKDPRINELYTEGS HHRNLSVIALNQNLYFNKDPTQRRNCHYLVMFNNPVDQQQIMTLARQMYPGNPQHLMRHFKDATSRPYGYLVIDLKPFTT EHQRLRTDIFDQSDDQKDPTCRFEDHMDQINKDDQKDIDHSEHISATDRTCFEEEKMHSCDDCGLVFENIHDLQRHVKTW CPENRRRKHDEDDEIIHKKMRLDDVASEEDDDSVEDDDDGFDFIVNEVWDDHSTQYDRKIKQLMADDMSKKDAKEEASDI MLSKDRSLFMRKYKDFLMHMHELNASRLHRMIKQEITELVAEKDVHIDQAMEQVIKRHRTDFDSLFENYDESDDEGDSED DMDTEDNINAGSFSGPDKLYRYVKKAGKYVISKYRIRKWLQRQEPYSLQRPLVRKFKRNTVITLGIDDQWDADLMDMTKF AKENDGYAYILVVIDIFSKYLWLRPTLDKRGESITAAFQTILEEGRQPTRIRTDKGQEFKSRSFNTLLKRNNIEHLYAQN TEIKANYAERVIKTVKAKIYRYMTYKQSQRYVDRLKDFNINYNSTFHRTIGMAPDKVNESKETNLWWKMYWPKKPLDAGK RKQTRKPFKFKVGDRVRVTHIRNPFTREYDQKWSGELFIIADRRIRGGIPVYKLKDYLEEDIIGTFYQPELQKVDTREDD VFKIETIIKTKGRGRNKQYLVFQRRKDGSVDFYRPWKEYKEGFGSTRGEYWLGNSAIHELTQKGSCELRIDMTNWQGTTG YAKYGSFKLENEANGFQLRIGKYTGNAGKDSLAYHNNMKFSTKDVDNDNYAKGNCAVICTGAWWDNACNESGLNGNYKVT NSDLGVEWDGFPNGKFMKSTKMMFRCK |
|