Gene
| Gene Model ID | pfu_aug1.0_1262.1_29645 |
|---|---|
| Locus | scaffold1262.1 : 30982 ... 41285 : - |
| To GenomeBrowser | scaffold1262.1:30982..41285 |
| Genes list of scaffold | scaffold1262.1 |
| Synonym | pfu_aug2.0_77.1_23388 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1262.1_29645.t1 | 1 | 1 | Med28 | 39 | 115 | 7.9e-19 | 67.8 | 7.6e-23 | 1.1e-18 | 67.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1262.1_29645.t1 | gi|242021293|ref|XP_002431079.1| | mediator of RNA polymerase II transcription subunit, putative [Pediculus humanus corporis] | 1.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1262.1_29645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1262.1_29645.t1 atgatggcttcaaatgggtctggaacacacttggtggatgacttagaagcagcctttcagaattgtctatcagggctgac atcccaagaacattttaatgtacaggatgtggacgaaatcaaagctggtacagatcagacagtgttaaagttcctagaga ttgccagacaaacggaggtgttgttccttcacaaacgactcatactgtcaaaacaaaaacccgagcagcttatgaaagat gaaacagatgaccttcgagctgagctggagaggaaagatctacttataaaaagacatcaagagaaacttcagcaatggca agctaaactgaagcaggtgaataataaaggtccgatatctaccacggctccaagcacatcacagctcgttacccagaatc ctctaccgatgggtccaccacatcagcagcagcaacacccggtacaacacggccctgtgggatatggaggcatgatgaga gggcagtcacagatgaacataccggatacagggcaagggcagggcataaacattggcccggggccaggtttccatcagca gtcacaaatggcccaatcacagccttcccacatgatgctacagagacagggctcagggcagggaccggggccaggtcatc agcttggcccccatcaacctcctcctgcatatccacagggccctctacagtttttggaacaaactatgtcaagtatcggc atgcctgagagaagatag |
|
Protein
| Protein ID | pfu_aug1.0_1262.1_29645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1262.1_29645.t1 MMASNGSGTHLVDDLEAAFQNCLSGLTSQEHFNVQDVDEIKAGTDQTVLKFLEIARQTEVLFLHKRLILSKQKPEQLMKD ETDDLRAELERKDLLIKRHQEKLQQWQAKLKQVNNKGPISTTAPSTSQLVTQNPLPMGPPHQQQQHPVQHGPVGYGGMMR GQSQMNIPDTGQGQGINIGPGPGFHQQSQMAQSQPSHMMLQRQGSGQGPGPGHQLGPHQPPPAYPQGPLQFLEQTMSSIG MPERR |
|