Gene
| Gene Model ID | pfu_aug1.0_1262.1_29646 |
|---|---|
| Locus | scaffold1262.1 : 41766 ... 46948 : + |
| To GenomeBrowser | scaffold1262.1:41766..46948 |
| Genes list of scaffold | scaffold1262.1 |
| Synonym | pfu_aug2.0_2591.1_05592 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1262.1_29646.t1 | 1 | 1 | Claudin_2 | 9 | 114 | 3.0e-06 | 27.0 | 5.0e-10 | 3.7e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1262.1_29646.t1 | gi|72007779|ref|XP_782805.1| | PREDICTED: transmembrane protein 127 [Strongylocentrotus purpuratus] | 3.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_1262.1_29646.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1262.1_29646.t1 atgtataactgtgttacacagaaggctgttatattaatgaagaccatcatagctttcacttttattgcaatgggctgttc tttacttggatttatgctggatcttattggaccaacaaagcgtgctctaaagattttacatcgaaatgcaataatgagta ttgtctctgtgatcctttgtgtgattgtcaatttgttttgttactggatgacagtggaaatccagtggctacagaaagta accaagatacacacaggaagtaaagtggttgtaacatttgacatcagtttttacctgataacagctgcgggtgccatggg tgtgttagccacggcacttaattgtctgcgtcgctatcctgtacacgacgattctcaggctagtgaacccctcatggagg attatgatggaatggatgcacttctcataccccctcccccacccccaccatcagaggatgcccctccccctgctgattcc actcccccaccagcttactctccatga |
|
Protein
| Protein ID | pfu_aug1.0_1262.1_29646.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1262.1_29646.t1 MYNCVTQKAVILMKTIIAFTFIAMGCSLLGFMLDLIGPTKRALKILHRNAIMSIVSVILCVIVNLFCYWMTVEIQWLQKV TKIHTGSKVVVTFDISFYLITAAGAMGVLATALNCLRRYPVHDDSQASEPLMEDYDGMDALLIPPPPPPPSEDAPPPADS TPPPAYSP |
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