Gene
| Gene Model ID | pfu_aug1.0_1262.1_29648 |
|---|---|
| Locus | scaffold1262.1 : 59948 ... 65945 : - |
| To GenomeBrowser | scaffold1262.1:59948..65945 |
| Genes list of scaffold | scaffold1262.1 |
| Synonym | pfu_aug2.0_2591.1_05594 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1262.1_29648.t1 | 2 | 1 | I-set | 13 | 86 | 1.8e-23 | 82.1 | 2.5e-15 | 3.8e-12 | 45.9 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 1 | Ig_3 | 16 | 73 | 2.2e-10 | 40.8 | 2.9e-09 | 4.3e-06 | 27.1 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 1 | Ig_2 | 17 | 85 | 4.6e-17 | 61.9 | 2.5e-11 | 3.7e-08 | 33.3 |
| pfu_aug1.0_1262.1_29648.t1 | 3 | 1 | ig | 17 | 71 | 2.5e-09 | 37.0 | 2.1e-08 | 3.1e-05 | 24.0 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 1 | V-set | 45 | 79 | 3.7e-12 | 46.1 | 1.8e-06 | 0.0027 | 17.5 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 2 | Ig_2 | 93 | 193 | 4.6e-17 | 61.9 | 4.6e-09 | 6.8e-06 | 26.1 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 2 | Ig_3 | 93 | 149 | 2.2e-10 | 40.8 | 0.002 | 3.0 | 8.4 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 2 | I-set | 101 | 204 | 1.8e-23 | 82.1 | 1.9e-11 | 2.8e-08 | 33.4 |
| pfu_aug1.0_1262.1_29648.t1 | 2 | 2 | V-set | 103 | 192 | 3.7e-12 | 46.1 | 7.9e-08 | 0.00012 | 21.9 |
| pfu_aug1.0_1262.1_29648.t1 | 3 | 2 | ig | 109 | 130 | 2.5e-09 | 37.0 | 0.016 | 24.0 | 5.1 |
| pfu_aug1.0_1262.1_29648.t1 | 3 | 3 | ig | 162 | 187 | 2.5e-09 | 37.0 | 0.043 | 64.0 | 3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1262.1_29648.t1 | gi|345328832|ref|XP_003431310.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1262.1_29648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1262.1_29648.t1 atgcagcctgagaagatgaagcgacagttaatcaagcgacccgtggacagctcagtacggctcaaatgtcgggccagcgg caacccacggccaagtatcacgtggatgaaggatcacgtgatcatacatggggcggatccacacaagcccacctggaccc ttcggctacaggagctaaaggagggggactccggtcattatacatgtttggtctcaaatagactgggtgctatcaattat acctacacactggaggttatagagaagatgaattctaagccagtactgatagcaccgcaccctctgaataccacagtaaa ctatggggagacaacctcattaaagtgtagaatagacagcgacatgacccctcacatacagtggttaaaaagagtagaaa atccttcattagtcaaaaatttgaacaacactatcgacgtagcaggacagaaatttattgtcctaaagacaggagaggtt tggaatggtcctgacggcacgtacctgaataagctgatgattcaccatgccacggaggccgatgccggcatgtacatatg tctgggtgctaataccataggatatagcttccgtagtgcattcctcactgtcatatcagactccagatctggatatacta aagattcaggatcaatcagcttacccataataataggagttcctgcctgtatagtgatctttatagtaactatagccatt atagtgctacagaaacggaaaaggaataaatatcctggaaacgtcgtcaaaagtccacattttaatcgtgttcccacaca tgaaccagattcatgtgtgcccccacaggggcataacccacaaactaatatccatgtgaatcccatgcatggtgtacaac ataaagacttgtatatgggcttacagagcccgcaacattctcagacaagcaatagagaccctttttctagcagggaacct ttatcaaatagagacgctatgtcaaatagagacgctatgtcaaatagagacgcgctttccaaaaacagtcatagtataga cttttatacggacatatcctcggtgtcacaaagccatcacaatcatcaccatatgcagcaatatccgtataactaa |
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Protein
| Protein ID | pfu_aug1.0_1262.1_29648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1262.1_29648.t1 MQPEKMKRQLIKRPVDSSVRLKCRASGNPRPSITWMKDHVIIHGADPHKPTWTLRLQELKEGDSGHYTCLVSNRLGAINY TYTLEVIEKMNSKPVLIAPHPLNTTVNYGETTSLKCRIDSDMTPHIQWLKRVENPSLVKNLNNTIDVAGQKFIVLKTGEV WNGPDGTYLNKLMIHHATEADAGMYICLGANTIGYSFRSAFLTVISDSRSGYTKDSGSISLPIIIGVPACIVIFIVTIAI IVLQKRKRNKYPGNVVKSPHFNRVPTHEPDSCVPPQGHNPQTNIHVNPMHGVQHKDLYMGLQSPQHSQTSNRDPFSSREP LSNRDAMSNRDAMSNRDALSKNSHSIDFYTDISSVSQSHHNHHHMQQYPYN |
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