Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1263.1_43965
Locus scaffold1263.1 : 7026 ... 9447 : +
To GenomeBrowser scaffold1263.1:7026..9447
Genes list of scaffold scaffold1263.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1263.1_43965.t1 1 1 tRNA_m1G_MT 14 180 9.0e-35 119.9 7.3e-39 1.1e-34 119.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1263.1_43965.t1 gi|291226591|ref|XP_002733279.1| PREDICTED: tRNA methyltransferase 10 homolog B-like [Saccoglossus kowalevskii] 0.0

Transcript
Transcript IDpfu_aug1.0_1263.1_43965.t1
Definition-
>pfu_aug1.0_1263.1_43965.t1
atgtacattatagaaaattgcatgggtatacaaagtgtatcagaggagaaaagtaaacttgcccagcagttatgtcgttt
gtatggcgtcaataggaagtctgtcaccccggctcatctgtattttgtaggatttgacaaagacggagaactttataagg
agtgtatcaggaaaaattcaggcttccaggattacaaggttgaaataacggaccagtcagtaacagaattgtttcccttg
gatgaaatagtctacctcacaccagatagtgacacagagttatcggaaattgatgacagtaaagtgtacgtactgggtgg
acttgtagacgagagtatatctacgaatacaacaaaagaaaaggccgagtctgtgtacatcagcacagctaaattaccaa
tatcacaatacatggagagagtagaacaagctagttattcccaagtgttggccattaatcaagtgtttgagattttgatg
accttcaagtctactggtgattggagaacagcattagctacaggtgtccctaaacgtaaaggatataaaataccgcactc
ctctggaaaataa

Protein
Protein IDpfu_aug1.0_1263.1_43965.t1
Definition-
>pfu_aug1.0_1263.1_43965.t1
MYIIENCMGIQSVSEEKSKLAQQLCRLYGVNRKSVTPAHLYFVGFDKDGELYKECIRKNSGFQDYKVEITDQSVTELFPL
DEIVYLTPDSDTELSEIDDSKVYVLGGLVDESISTNTTKEKAESVYISTAKLPISQYMERVEQASYSQVLAINQVFEILM
TFKSTGDWRTALATGVPKRKGYKIPHSSGK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495