Gene
| Gene Model ID | pfu_aug1.0_1264.1_58416 |
|---|---|
| Locus | scaffold1264.1 : 80 ... 8955 : - |
| To GenomeBrowser | scaffold1264.1:80..8955 |
| Genes list of scaffold | scaffold1264.1 |
| Synonym | pfu_aug2.0_2335.1_18773 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1264.1_58416.t1 | 1 | 1 | RVT_1 | 95 | 173 | 2.5e-08 | 33.5 | 4.3e-12 | 3.2e-08 | 33.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1264.1_58416.t1 | gi|66816797|gb|AAY56756.1| | reverse transcriptase SR3-right [Schistosoma mansoni] | 4.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_1264.1_58416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1264.1_58416.t1 atgtatgtaatcacccgaggagtccgactgacatcagagaggacaggtgtcggggccctgtcttctctaaagagatttgg acagggcccgtcatggagtcccatcgtcacattacgtcatggtatggcttatttcctgatactgaccactgacggcttga actttatcctgagtgaccaggaagtaatggacatcgtctgtagctgtccgacaccaagtcaagccgcgtcgtttataact gaccaggcattacagtttggtacagaggacaatacgaccacagtagcaatggggaaggagcaaattgggttcagaagaaa cagggcatgtacagacaacatcttttgcctacgtaacatcattgattcggaggggagagcatcgctgtacataaacttca tagactttgagaaagcgtttgacagtatacatcgggtcacactatggaagatcatggaggtttatggaataccaagaaag attataggtattatcaaggacatgtatgaggaattaagggtatgctccaaatatgaagatttcatcattagagccagacg gcttgcaggtaagctacttgttcatggttatgatacacaacggctaaaatcatcattgaggaagttcttctgtcgctacg gggatgtaataaaagcatctgagatccccctttccagaatgatcattgacattctacattgtgattga |
|
Protein
| Protein ID | pfu_aug1.0_1264.1_58416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1264.1_58416.t1 MYVITRGVRLTSERTGVGALSSLKRFGQGPSWSPIVTLRHGMAYFLILTTDGLNFILSDQEVMDIVCSCPTPSQAASFIT DQALQFGTEDNTTTVAMGKEQIGFRRNRACTDNIFCLRNIIDSEGRASLYINFIDFEKAFDSIHRVTLWKIMEVYGIPRK IIGIIKDMYEELRVCSKYEDFIIRARRLAGKLLVHGYDTQRLKSSLRKFFCRYGDVIKASEIPLSRMIIDILHCD |
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