Gene
| Gene Model ID | pfu_aug1.0_1265.1_51242 |
|---|---|
| Locus | scaffold1265.1 : 11066 ... 16768 : + |
| To GenomeBrowser | scaffold1265.1:11066..16768 |
| Genes list of scaffold | scaffold1265.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1265.1_51242.t1 | 1 | 1 | AA_permease_2 | 4 | 137 | 2.3e-13 | 49.4 | 3.4e-17 | 2.5e-13 | 49.3 |
| pfu_aug1.0_1265.1_51242.t1 | 1 | 1 | AA_permease | 17 | 124 | 1.6e-08 | 33.3 | 3.7e-12 | 2.8e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1265.1_51242.t1 | gi|156545878|ref|XP_001606549.1| | PREDICTED: cationic amino acid transporter 4 isoform X2 [Nasonia vitripennis] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_1265.1_51242.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1265.1_51242.t1 atggcgccaattattctggctgcgatactcattgcacttgacgtcaaggtaacttcagcgattgcaatcattttaacaac gctcagtgtgtttatgacgttttgcatcatctgtgtcggattcttccatgtaaaacatgaaaattggaccgatccaccag ggttcttccctaatggattacaaggaactctctgcggaacatctctgctgttttatgtatttgctagtgctgacaggatt gcttgtagttcagaagaaacaaaagaccctacgaaagttgttccaacgggaatatgctttaccctcgccatgacatccat attgcttttttgtgcatcaattgcagttactttatgctttcccggaaacctctttcctgaatctgcggcactaccgatca tatttcgcaacagaggaatagaggctcgtcaacgaattaactgggacgccaatttattcgataatatttgcatttctggt gtcaacagtggttatgctctctatgagtctcgaattgcttattcttatgaacagtgtatcaaccttgatatcaagcattc tagtatagtcatctacattagttatggaatcagacacagcgaggagagaaaaatagacgagcaagaagttatattgtacg aaattacagagaactga |
|
Protein
| Protein ID | pfu_aug1.0_1265.1_51242.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1265.1_51242.t1 MAPIILAAILIALDVKVTSAIAIILTTLSVFMTFCIICVGFFHVKHENWTDPPGFFPNGLQGTLCGTSLLFYVFASADRI ACSSEETKDPTKVVPTGICFTLAMTSILLFCASIAVTLCFPGNLFPESAALPIIFRNRGIEARQRINWDANLFDNICISG VNSGYALYESRIAYSYEQCINLDIKHSSIVIYISYGIRHSEERKIDEQEVILYEITEN |
|