Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1268.1_58424
Locus scaffold1268.1 : 43176 ... 53948 : +
To GenomeBrowser scaffold1268.1:43176..53948
Genes list of scaffold scaffold1268.1
Synonym pfu_aug2.0_421.1_04146

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
egg-4cell 4
egg-Dshape 2
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_1268.1_58424.t1
Definition-
>pfu_aug1.0_1268.1_58424.t1
atgctacagtcaatggagaatgcatccatgggatctcatcttgaggttagacttgcctctgatatcaaacaggactctgt
taatacattcctacaatatctttatgaaggatttatgatgcttacagaagaaaactgcaaagacgtggaaaaaatagcga
gactcctacaagtagacagtattataaagtgcatatctgacttttacaaatgcctaagtgccaaaactggatgtaacatt
gatgataggtacaaatactcgtcttttgacttactggagttcaaacatatcagggcttcctctattcagaagacattaca
cgaagcagccctgaaaagaggatccgatttttccagaccacaaagcccaggaaataagcgtcagcgactgcatagagccc
ccagtcccaatgattccaggctgaatcaaagggcagatgacacgctcagcatggcacatagctacacacagggcgggcag
ggccgagacccttgggatccgaggggtaggggagggacaagagttccccctcaaccaggtgtgatagacattgtagaaga
tagcattgaaataatccagtcggatcagtctgataagggagacggacatataaaacagaaaagtgtctcaataggagtga
ctagtcagtacaatacagccaccgatgtccgagtcgtcagtgttaatgactcaggcgggactggcaaacttcatacatca
ggtgctaaatcacatgacccactgcagaactcaaatagtgacgctcgtggttctataacagtcagtcccttgccaatatt
tgattcttcatctagtcagtcatcaatcaataggacatcagactcacaaatggacattccgtcagtacgccccaccccac
cctcacagcctgtttttcccaccctcacccctataccaaagcagtctgtaccaaagccttttgccgcaggaagcatgtca
caagcaacatcatcgccttcatcatcagaggctaagtcagtatcccccttgaatgcagatcacacagataaaagggatac
ggctaacaaagacgacgtcatctcagaagacggaacacccgatttgaagattgtaaaaatcgagactaacgacagtctca
cgggtggtttagatatgtatgtagataaaggtgaagatggaatgttaagactacacggaatagaggacgggcaaaatgac
gatggcagtgatgtggaacatgatcattctgtcgattggtcaaaagaagaaatgtcaaatgaaggcagcaatgttagcac
tgaccagaataattcctggtacatagaccaattcaaagtaaattttacttttaaagttatatatgacaaaggtctcaaaa
tgcccctaattttccgaatttcaaaggccctggcccctgtcccaaatattgttggagagccctacatctga

Protein
Protein IDpfu_aug1.0_1268.1_58424.t1
Definition-
>pfu_aug1.0_1268.1_58424.t1
MLQSMENASMGSHLEVRLASDIKQDSVNTFLQYLYEGFMMLTEENCKDVEKIARLLQVDSIIKCISDFYKCLSAKTGCNI
DDRYKYSSFDLLEFKHIRASSIQKTLHEAALKRGSDFSRPQSPGNKRQRLHRAPSPNDSRLNQRADDTLSMAHSYTQGGQ
GRDPWDPRGRGGTRVPPQPGVIDIVEDSIEIIQSDQSDKGDGHIKQKSVSIGVTSQYNTATDVRVVSVNDSGGTGKLHTS
GAKSHDPLQNSNSDARGSITVSPLPIFDSSSSQSSINRTSDSQMDIPSVRPTPPSQPVFPTLTPIPKQSVPKPFAAGSMS
QATSSPSSSEAKSVSPLNADHTDKRDTANKDDVISEDGTPDLKIVKIETNDSLTGGLDMYVDKGEDGMLRLHGIEDGQND
DGSDVEHDHSVDWSKEEMSNEGSNVSTDQNNSWYIDQFKVNFTFKVIYDKGLKMPLIFRISKALAPVPNIVGEPYI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495