Gene
| Gene Model ID | pfu_aug1.0_1268.1_58425 |
|---|---|
| Locus | scaffold1268.1 : 67026 ... 68846 : + |
| To GenomeBrowser | scaffold1268.1:67026..68846 |
| Genes list of scaffold | scaffold1268.1 |
| Synonym | pfu_aug2.0_421.1_04144 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1268.1_58425.t1 | 1 | 1 | DUF3504 | 54 | 203 | 2.1e-12 | 47.1 | 2.1e-16 | 3.1e-12 | 46.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1268.1_58425.t1 | gi|47209123|emb|CAF93457.1| | unnamed protein product [Tetraodon nigroviridis] | 9.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1268.1_58425.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1268.1_58425.t1 atgcatgcaggtccttttaacatcaataagctcggcgacgtacgggaggggctgttcacttatcttaaaggagttaacag tacgtggaaaaactacctcagtcaccccgcacatactcaaaaatacaaagtgaacgaagtaaagcgaaaggtgtcgatgt ctggtgatgacgtcagaaggctgatgaattccggtgttctcgatatagatactcctctaggactgttcaggaaggtctgg cttgacctcgccattcatttaggaattggtggacaggcggcgatgaggtccttaacattcgattcgttcgtcgcggaaac agacgacaaaggcagacgatattatcgtctgaatcgcgatggcgtcgatagacagcaagcaagatcgtgtatggagatgc agtattggaattgggaagggaaaatgtacgaaatcagcaacgaccgactttgtcctgttaaatcaatggatcggtattat gagagaagaaacatgatgagggaatcgttttttcaacgccccaaaacatctgtgcatcatctagaaacgtcttggttcga atctcctgtaggacatagtgttctggcttgtttgttgaccaaaatgtcagaagagagtatgctacagaaatcgtacacca attctagtctgaaaataacgcttgccgactttttggaggcggaaggatatgacgttgaggagttactgggtgtacatccg cgaaataaaacaacaaggaactaccgtgctaatctcagaaaacttactgcagacgaactttgtcacaatagttttgtcat acacaacgccctctaccggtttgtagaggatagacaggaaactccacaaaagacgtga |
|
Protein
| Protein ID | pfu_aug1.0_1268.1_58425.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1268.1_58425.t1 MHAGPFNINKLGDVREGLFTYLKGVNSTWKNYLSHPAHTQKYKVNEVKRKVSMSGDDVRRLMNSGVLDIDTPLGLFRKVW LDLAIHLGIGGQAAMRSLTFDSFVAETDDKGRRYYRLNRDGVDRQQARSCMEMQYWNWEGKMYEISNDRLCPVKSMDRYY ERRNMMRESFFQRPKTSVHHLETSWFESPVGHSVLACLLTKMSEESMLQKSYTNSSLKITLADFLEAEGYDVEELLGVHP RNKTTRNYRANLRKLTADELCHNSFVIHNALYRFVEDRQETPQKT |
|