Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12685.1_10504
Locus scaffold12685.1 : 1 ... 6271 : +
To GenomeBrowser scaffold12685.1:1..6271
Genes list of scaffold scaffold12685.1
Synonym pfu_aug2.0_2780.1_02253

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_12685.1_10504.t1 1 1 C1q 63 145 6.8e-13 48.7 6.8e-17 1.0e-12 48.1

Transcript
Transcript IDpfu_aug1.0_12685.1_10504.t1
Definition-
>pfu_aug1.0_12685.1_10504.t1
gatcgaacaatgagagctatatattggttaagcttgaccatagtctgtgctgttaatggctcagagaaaacaccacatac
cgtgtatgggatccttggtgacgtcatgaaggaacaactaggcgtgataaaacattgcatggtcagcagatgtaccggaa
gtccacatagacgacaccgtaatattgctttccaagctcatccttcgaagcatctgcagaatattccagcaaagacgaca
gtggtatttgacgtggctactgaaaacattggaaatgcatacgatccccggacaggaattttcactgcgccagttgatgg
agcgtatgtatttcactggacaacattggtacatccgggtaaatatttcatcacatttcttaaagtaaacggggttggta
agagtcataactatggatacgcaaaaaacagcaaagactgtttctttgacttcaagttccgacggatagattctgctaag
gtaaattttgaattattgatggacatcgtctatatatctgtaaagacgatgttaaagtcagaagatgttaaagttaaagt
cagagcccaaagattgaatgaattcagcttcgtatga

Protein
Protein IDpfu_aug1.0_12685.1_10504.t1
Definition-
>pfu_aug1.0_12685.1_10504.t1
DRTMRAIYWLSLTIVCAVNGSEKTPHTVYGILGDVMKEQLGVIKHCMVSRCTGSPHRRHRNIAFQAHPSKHLQNIPAKTT
VVFDVATENIGNAYDPRTGIFTAPVDGAYVFHWTTLVHPGKYFITFLKVNGVGKSHNYGYAKNSKDCFFDFKFRRIDSAK
VNFELLMDIVYISVKTMLKSEDVKVKVRAQRLNEFSFV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495