Gene
| Gene Model ID | pfu_aug1.0_127.1_43487 |
|---|---|
| Locus | scaffold127.1 : 38766 ... 50423 : + |
| To GenomeBrowser | scaffold127.1:38766..50423 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug2.0_837.1_24455 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_127.1_43487.t1 | 2 | 1 | Ldl_recept_a | 11 | 55 | 9.2e-07 | 28.6 | 6.2e-11 | 9.2e-07 | 28.6 |
| pfu_aug1.0_127.1_43487.t1 | 2 | 2 | Ldl_recept_a | 100 | 105 | 9.2e-07 | 28.6 | 0.33 | 4900.0 | -2.5 |
Transcript
| Transcript ID | pfu_aug1.0_127.1_43487.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_127.1_43487.t1 atgtaccggacctttcaaattatttacggtaaatgccatgaagacgagtttatgtgtaatactgcccttgggacatctga taacaatttggtggaatgtataccaactcagtatcactgtgactctttttatgattgtagcgactcttcagacgagttat attgctcatatataggagtttttgcagtgggaggtataaggatgatactgtctttatattgccttacaagacacgacatt tatggacaaaattatgaagattatgaactaagatcaatcacagagaaaggacagatttgcacaaattcatcttgccaagc acatccaggatatggcattttctgcagcgttatggaagaagagcaatactgccatgtacccttctgtggttttggatctt tagactatcgattaacatgcgacttcacaatatcgacatgtggatggaatgtccgatcaagagccacattcaggaaatgg atttcagaacacaacagacgcgagccgggctctattctccaataa |
|
Protein
| Protein ID | pfu_aug1.0_127.1_43487.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_127.1_43487.t1 MYRTFQIIYGKCHEDEFMCNTALGTSDNNLVECIPTQYHCDSFYDCSDSSDELYCSYIGVFAVGGIRMILSLYCLTRHDI YGQNYEDYELRSITEKGQICTNSSCQAHPGYGIFCSVMEEEQYCHVPFCGFGSLDYRLTCDFTISTCGWNVRSRATFRKW ISEHNRREPGSILQ |
|