Gene
| Gene Model ID | pfu_aug1.0_12706.1_32255 |
|---|---|
| Locus | scaffold12706.1 : 3674 ... 11525 : - |
| To GenomeBrowser | scaffold12706.1:3674..11525 |
| Genes list of scaffold | scaffold12706.1 |
| Synonym | pfu_aug2.0_7416.1_22827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12706.1_32255.t1 | 1 | 1 | Methyltransf_16 | 3 | 116 | 6.0e-12 | 45.3 | 2.6e-15 | 7.7e-12 | 44.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12706.1_32255.t1 | gi|344288837|ref|XP_003416153.1| | PREDICTED: calmodulin-lysine N-methyltransferase [Loxodonta africana] | 7.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12706.1_32255.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12706.1_32255.t1 atgacatgtttagcaggggtagccgtttcaattttatctgaagcacagagtgttgttttaactgatggaaatgaggaatc tattgacaatctgacagacatcttgaatgataaaagtaatgccgaattactcaggaaaactaaagtatcaagcagaatgt tgagatggggaggaggtgaacttgataaagatctcagaggtcactttgatattattatttgtgcagattgtcttttcttt gatgagggaagagaggatttagtacaactggtctatgatctgctcaaacccaatggcaaatgctggatgtttgcacctaa gagaggggctacttttgatgaattcaaacaagttgcagaagaaaagtttcacactttagaggaggagagatttgaaaaga aaatctatgatcttcattgcaagttaaaggagagtggcacagatcagtatgatccaaacatccatttcccaatccatctg cagctaacaaagaaagatgtctcatag |
|
Protein
| Protein ID | pfu_aug1.0_12706.1_32255.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12706.1_32255.t1 MTCLAGVAVSILSEAQSVVLTDGNEESIDNLTDILNDKSNAELLRKTKVSSRMLRWGGGELDKDLRGHFDIIICADCLFF DEGREDLVQLVYDLLKPNGKCWMFAPKRGATFDEFKQVAEEKFHTLEEERFEKKIYDLHCKLKESGTDQYDPNIHFPIHL QLTKKDVS |
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