Gene
| Gene Model ID | pfu_aug1.0_1271.1_51246 |
|---|---|
| Locus | scaffold1271.1 : 10456 ... 24311 : + |
| To GenomeBrowser | scaffold1271.1:10456..24311 |
| Genes list of scaffold | scaffold1271.1 |
| Synonym | pfu_aug2.0_4.1_13314 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1271.1_51246.t1 | 1 | 1 | RFX_DNA_binding | 81 | 160 | 1.6e-36 | 124.3 | 6.2e-40 | 4.6e-36 | 122.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1271.1_51246.t1 | gi|115700000|ref|XP_790942.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1271.1_51246.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1271.1_51246.t1 atggaacaaaagttgacgacagtgcaaaatgcctaccagacggagtacggacagacaatgtatacacctgtatcaggtac ttactaccagacaggatctcagcaggtgggcagtggtgtcactcagcttggggtacagacggtacagggacagattgtac agcatcaggggggcacttaccttatacagggagggaccatggatggagagggtaccccacttacacacacaacaagagcc tctccagccacagttcagtggctgatagacaactatgagactgcagagggagttagcttaccccgaagcactctgtataa tcactatttacgacattgtacagaacagtctctggaccccatgaatcctgcttcatttggtaaactcatacgatcagtat ttcttggactacgcacacgcagactgggcacaaggggcaattcaaagtatcactattatggcataaggattaaggcaaac tccccccttaatcaattcacagatgatcaaacaatggcaatgagacagcagcctatgtaccaagggaaaaacaaagggga atctgactctgagagtggacatggtcacccaggacagattgaccaggctacagcacagcagcagcagcatcagcagttcc taggtgacgcttccgcagctctgccaaactttggtgatatagacatgtcagctccgttacctgagggagtcactgcagat catgtccgtgccttcgagaagatgtacagagaacatgctgaggccatagtagatgtagttgtgaatttgcagttttctct catcgaagctctatggcaagggttttggcgaaaccagcctcctgatcaactcactgctgataatgattatgagaagcgcc ttcccaaggacaagttatatgctgtcagtggatatgaggctgtacaagaatatgttagacgagctgattatacattttat caagccttagtagaagtcctaattcctgatgtactccgcccaattcctagctcattaactcaagctataaggaactttgc caagagtttggagaattggttaaaaggtgccatgacgggtgtaccagagggaatgatcaagactaaggtcagtgcggtta gcgccttcgctcagactttacgtcgatacacatcactgaatcaccttgctcaggctgctagggcagtattacagaataca tcacagatcaaccaaatgttgaccgatctcaatagggtggactttgcaaatgtacaagaacaggcatcatgggtatgtca gtgtgaagacgctgtagtacaacagttacaagaagattttaagaaaacacttgagtcccagaattcacttgaacagtggg cagtttggttagagggtgtggtcaatcaggtcctcaagcctcatgaagggagtgacaatttccctaaggcagctcgacag tttcttctgaaatggtcattttatagttctatggtgattcgagacttgacactgcgcagtgctgctagttttggatcttt tcacttgatccgccttttatatgatgaatacatgttttatctggtggaacataaagtagcagcagccactggggaaacac ctatagctgtcatgggtgaagtcagacagttcatagatttgagcagtgctgtcctgatgagtaacctagaagctgagact aagccaaatgttatcaccaaagcccctcccacctcagtgaacgctacatcaggtacatctatactgaacaaagtggacag tgcccagagctcggccactaccttgatggtcctctctaactcgggtacaaccagtaacgccgtcaatggtagccttatag tcacctcggcccctggaactaacgcctccacagtaacggtcagagcagctaacacccccatacagggggccaagaccatt gtagtcatgccagtgtccagctccataggctcaggggatggacagaacaaaagattaaaggtggaataa |
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Protein
| Protein ID | pfu_aug1.0_1271.1_51246.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1271.1_51246.t1 MEQKLTTVQNAYQTEYGQTMYTPVSGTYYQTGSQQVGSGVTQLGVQTVQGQIVQHQGGTYLIQGGTMDGEGTPLTHTTRA SPATVQWLIDNYETAEGVSLPRSTLYNHYLRHCTEQSLDPMNPASFGKLIRSVFLGLRTRRLGTRGNSKYHYYGIRIKAN SPLNQFTDDQTMAMRQQPMYQGKNKGESDSESGHGHPGQIDQATAQQQQHQQFLGDASAALPNFGDIDMSAPLPEGVTAD HVRAFEKMYREHAEAIVDVVVNLQFSLIEALWQGFWRNQPPDQLTADNDYEKRLPKDKLYAVSGYEAVQEYVRRADYTFY QALVEVLIPDVLRPIPSSLTQAIRNFAKSLENWLKGAMTGVPEGMIKTKVSAVSAFAQTLRRYTSLNHLAQAARAVLQNT SQINQMLTDLNRVDFANVQEQASWVCQCEDAVVQQLQEDFKKTLESQNSLEQWAVWLEGVVNQVLKPHEGSDNFPKAARQ FLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHKVAAATGETPIAVMGEVRQFIDLSSAVLMSNLEAET KPNVITKAPPTSVNATSGTSILNKVDSAQSSATTLMVLSNSGTTSNAVNGSLIVTSAPGTNASTVTVRAANTPIQGAKTI VVMPVSSSIGSGDGQNKRLKVE |
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