Gene
| Gene Model ID | pfu_aug1.0_1271.1_51247 |
|---|---|
| Locus | scaffold1271.1 : 24364 ... 34965 : - |
| To GenomeBrowser | scaffold1271.1:24364..34965 |
| Genes list of scaffold | scaffold1271.1 |
| Synonym | pfu_aug2.0_4.1_13315 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1271.1_51247.t1 | 2 | 1 | PQ-loop | 124 | 180 | 1.4e-36 | 123.8 | 3.4e-21 | 5.0e-17 | 61.1 |
| pfu_aug1.0_1271.1_51247.t1 | 2 | 2 | PQ-loop | 269 | 326 | 1.4e-36 | 123.8 | 5.5e-23 | 8.1e-19 | 66.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1271.1_51247.t1 | gi|320169718|gb|EFW46617.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1271.1_51247.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1271.1_51247.t1 atggtgctagtgatacaccatgctagctgtgtgaccttaagcttctcctcagattccttgtccttacagataggtgacac caaaacattgtctctaacaccaagcgatacattacaagcagaaactgtagtcagttttacataccagattggtaatgaca tcctttatactgaggagaaaaagctgattttaccattgaaggctgtagtcataccagcgaacaccagcaagtctgtacaa ttcaacgtgacggcaaataaagcaggaaatgtatacctaggaataaactcctcctcagaggaacttgaggatttggagga tcagtttgtgaagattgagatagtacacaactcagtgctggtgatcgttaacagtgttataggatggatatattttgcag catggtccatctctttttatcctcaggtgtttgagaactggagaagaaaaagtgtgataggcctaaactttgacttcctc gcatacaacataactggctttgtggcatacggagtgttcaatgtgggcctttactggataaaaagtgtacaggaccagta ttttatgatgtttagatcatttgaggagcatccacgtggtatcaatcctgtacaactgaacgatgtaatcttcacattac atgctgtgtttgtgacgttgattacaatctttcagtgctgtatatatgatagaggtaaccagaggatatctaaggtgtgt aagctactcctgacattagcgtggttgtttattggagtatcactggtactgtcactcaccaaagttatcacgtggctcag atatctacagttcttctcctacgtcaaactaggggtcactctgatcaagtatattcctcaggcttacatgaattatcgga ggaagagcactctaggttggagtataggaaatgtactgttagatttcacagggggaagcttcagcttgcttcaaatgttc ttcctggcctacaacagtgatgattggagttctttgttcggtgaccccactaagtttggactgggtgctttctctatctt gtttgacattctgtttattgtgcagcattattgtctgtacagaaagaaccaggactatctgttgatcagagaggagagag atgtactccttaacaaagagagcagtaacctgtcagtgtccaacacttacaactag |
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Protein
| Protein ID | pfu_aug1.0_1271.1_51247.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1271.1_51247.t1 MVLVIHHASCVTLSFSSDSLSLQIGDTKTLSLTPSDTLQAETVVSFTYQIGNDILYTEEKKLILPLKAVVIPANTSKSVQ FNVTANKAGNVYLGINSSSEELEDLEDQFVKIEIVHNSVLVIVNSVIGWIYFAAWSISFYPQVFENWRRKSVIGLNFDFL AYNITGFVAYGVFNVGLYWIKSVQDQYFMMFRSFEEHPRGINPVQLNDVIFTLHAVFVTLITIFQCCIYDRGNQRISKVC KLLLTLAWLFIGVSLVLSLTKVITWLRYLQFFSYVKLGVTLIKYIPQAYMNYRRKSTLGWSIGNVLLDFTGGSFSLLQMF FLAYNSDDWSSLFGDPTKFGLGAFSILFDILFIVQHYCLYRKNQDYLLIREERDVLLNKESSNLSVSNTYN |
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