Gene
| Gene Model ID | pfu_aug1.0_1276.1_36903 |
|---|---|
| Locus | scaffold1276.1 : 1 ... 18765 : - |
| To GenomeBrowser | scaffold1276.1:1..18765 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_593.1_10962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36903.t1 | 1 | 1 | UCH | 40 | 297 | 3.5e-31 | 108.3 | 6.7e-35 | 5.0e-31 | 107.8 |
| pfu_aug1.0_1276.1_36903.t1 | 2 | 1 | UCH_1 | 41 | 298 | 2.0e-12 | 47.1 | 8.6e-16 | 6.4e-12 | 45.5 |
| pfu_aug1.0_1276.1_36903.t1 | 2 | 2 | UCH_1 | 681 | 681 | 2.0e-12 | 47.1 | 0.26 | 1900.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1276.1_36903.t1 | gi|326913172|ref|XP_003202914.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36903.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36903.t1 atgagagttttggagcaaagtttagctgaaagtaaagctggcacaaaacgtaagcgaggtgatttatggttcgtggatcc tctgaacccccatgaaagaaagcgacaggagggatgtccagtgggcctgaaaaacgtaggcaacacttgctggttcagtg ctgttatacagtccctctttcatttacgacgatttagaagattagtattgaattttcaagtgccaaaagataacggacaa ttgaacctcacagagacaagaaatttacgattcatgcaggagttgcgatacctgtttgcgctgatggtcgggtcaagtaa gaagtatgtggacccgtctaaggctgtggatatacttaaagaagctttctcacagtcagcggtgggggtgggcgacgccc agcaggatgtgagtgaatttcagcataagctgttagaatggttagaagatgcctttaagtgtcacccctcaacttcagga catgggtcagggggagataactctgaggcaggtgaatgcagtcggagaaatccgatggtggagttgttttacggacagta cagagcagagggggtaaatgagggtaaaggctttagcaacgatgagacatttgggcagtttccgctgcaggtgaatgggt tccgtgatattcacgagagtctagaagctgcgactgcccaaggcgaaatagaaacagtcagtacagagagtacacagaaa tctggtcaggagttatggttcactcgactgcctcctgtgctgacctttgaactctccaggtttcagttcaaccaacaatt aggccggccagaaaaaattcacaacaaaatagaattccctcatattatttatatggacagatacctcggtctaaataaag cagagactagaaaacggcgagagcaagtgaaaaaattaaaagaagaattagtagtgctgtatgctaaattagataaattt aaccactacggttctggtagtaagaaagttcctctacaagatgtattatcctacgcattagaattcgcacacacaaagcc agatagcagtaatgtgtcagtctcctcacaggacgtggaaatgacgtctccgtttaaagctaatgtctctacgtctagtg tagacaatatggtgacagattccccatccaaagcagaagtctcctccaagatatctgctgccactccccctaaatgtagt cgaaccactgccatgatatgtgaccccgcccctcgacatatagaagaaacagaactaaaggtgctacaacagtgtctgtg tagatggagaacagaagtagaacaagatgtgagagcactgacttctataaggggcggcacccggcgaaatatcgccgact cagatgataaaaatcgccagtttgaatttcctctgatcgggaggggaaggagggtgtggcaggtcaagggaggggatggt caacataaaaccagtaaggttgttacaagtccaaacagaagtacagtgagtacacagacgggctccagtttaaagaatca gtatcctgtgatccatgccgagctaagctgtaaaagaacgatagagattgtgtccgatgtggtagaattagaaacatttc aaaccaaaggagcccctgctgcactcaaactggcgtgctctgcagagtttaaacgagtagaacagatagtgaagaccctt ccccataaacttcctcgtgaggacccccgactccagcaccccgtcgtgtaccttatagcctgtaatgcccagagtaaagt gattgacaggttcctttatgaacagtttgcttactgtccgctactgcagaacgatgaaagggcgagaaaaattcaagagg ctgccagatcaaagttaaaacaattattagagagtccagacggacagaaactagatcagtcttgtcagcacatcaacgat atggtggcgcatcagtttgaaaataacgatgacatcactggagctctagacattatgaatgatatggtactaccttgtct aacgatgctgcttaactctggtaaccaagacgatgtttgtgccgcagaggaaattcgggagaaatggtgcgcgttcttag gacatgaaattggagagaaaaaagttgagaaattgcaggactttctatcaaagttgtttgatccacctactgaaaccaaa cggactcagatccagagtccctcaatgtcggacttaaaggacttatataagacttacttagatgtgatggacctagcgga aaggtcaggatatctggaacgagcgtaccgtagtaaatga |
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Protein
| Protein ID | pfu_aug1.0_1276.1_36903.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36903.t1 MRVLEQSLAESKAGTKRKRGDLWFVDPLNPHERKRQEGCPVGLKNVGNTCWFSAVIQSLFHLRRFRRLVLNFQVPKDNGQ LNLTETRNLRFMQELRYLFALMVGSSKKYVDPSKAVDILKEAFSQSAVGVGDAQQDVSEFQHKLLEWLEDAFKCHPSTSG HGSGGDNSEAGECSRRNPMVELFYGQYRAEGVNEGKGFSNDETFGQFPLQVNGFRDIHESLEAATAQGEIETVSTESTQK SGQELWFTRLPPVLTFELSRFQFNQQLGRPEKIHNKIEFPHIIYMDRYLGLNKAETRKRREQVKKLKEELVVLYAKLDKF NHYGSGSKKVPLQDVLSYALEFAHTKPDSSNVSVSSQDVEMTSPFKANVSTSSVDNMVTDSPSKAEVSSKISAATPPKCS RTTAMICDPAPRHIEETELKVLQQCLCRWRTEVEQDVRALTSIRGGTRRNIADSDDKNRQFEFPLIGRGRRVWQVKGGDG QHKTSKVVTSPNRSTVSTQTGSSLKNQYPVIHAELSCKRTIEIVSDVVELETFQTKGAPAALKLACSAEFKRVEQIVKTL PHKLPREDPRLQHPVVYLIACNAQSKVIDRFLYEQFAYCPLLQNDERARKIQEAARSKLKQLLESPDGQKLDQSCQHIND MVAHQFENNDDITGALDIMNDMVLPCLTMLLNSGNQDDVCAAEEIREKWCAFLGHEIGEKKVEKLQDFLSKLFDPPTETK RTQIQSPSMSDLKDLYKTYLDVMDLAERSGYLERAYRSK |
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