Gene
| Gene Model ID | pfu_aug1.0_1276.1_36905 |
|---|---|
| Locus | scaffold1276.1 : 25956 ... 53741 : + |
| To GenomeBrowser | scaffold1276.1:25956..53741 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_593.1_10963 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36905.t1 | 3 | 1 | ABA_GPCR | 33 | 95 | 0.0 | 156.4 | 0.059 | 220.0 | 0.8 |
| pfu_aug1.0_1276.1_36905.t1 | 1 | 1 | DUF3735 | 149 | 218 | 3.5e-25 | 87.8 | 2.5e-28 | 9.2e-25 | 86.4 |
| pfu_aug1.0_1276.1_36905.t1 | 3 | 2 | ABA_GPCR | 284 | 375 | 0.0 | 156.4 | 1.7e-29 | 6.2e-26 | 90.7 |
| pfu_aug1.0_1276.1_36905.t1 | 3 | 3 | ABA_GPCR | 375 | 436 | 0.0 | 156.4 | 4.1e-25 | 1.5e-21 | 76.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1276.1_36905.t1 | gi|346471009|gb|AEO35349.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36905.t1 atgaaaacgattatccataaacctctatttaaactttttttatgttttggtagcacgcgaaaaaggatatttttctttgc tggaggttatgtttttttcatcaagcagctattcagagattatgaggtacatcacacggtcgttctactggtattttccg tgacgttttctctatcctgtactatgtttgaactcatcatatttgagatactgggcgtcatggaatccagttctcgttat ttccattggaagcttggcctgtattccatcctgtttgttcttattgccgtactaccattctatattggttacttcatcat tggaaatatcagactggtaccacaaaaaagacattggcgagccggcttgacagcggctgtatggtttgtattcttgtacc ttttctggaaggttggagatccatttccgatactcagtcctaaacatggtatattttccattgagcagtgtatagggagg ataggggttctgggagtgaccttgatggccgttttgtcgggtttcggagctgttaattatccttacacctccatgttcta ctttatcagagctgtttctgatgcagatatacagggagtagaaaaacgtctgatgcagaccatggatatgatcataatga agaagaaaagggttgcccttgccaagagggagagtttaaaacaagccagtatcaaccaatcacagggaggaatatggggg atcttcaaaaacgtacgactggccgcaccaagtacagaaaatattccgttactcaaacaggaaactgatgcatatgaaga gttgagcaggcagctatttttagaatctgttgatttgcacaatgcccaggagagaatagcttactcaaaaacctttaaag ggaaatattttaattttctgggatatttcttctccatatactgtgtatggaaaatattcatatcaacagtgaacataata tttgaccgtgtgggaaaagtggaccctgtcacaagaggaatagaaatagccgttaattacctcgggattcagtttgacgt tttattctggtctcagcagatctcgttttacttaataggaatcatcattataacctctgttaggggtctgttgttaacac tagccaagggcatgtattttgtatcatcagttcttttaatgaggatgaatatgccacaagaatatagaatgattatcaca gaggtgctaggagaactacagtttaacttttaccatagatggtttgatgtgatattcctgattagtgctttatctagtat aggatttctatatatagcgcataaacatccgcaggagaaaagtgttacaggatactga |
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Protein
| Protein ID | pfu_aug1.0_1276.1_36905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36905.t1 MKTIIHKPLFKLFLCFGSTRKRIFFFAGGYVFFIKQLFRDYEVHHTVVLLVFSVTFSLSCTMFELIIFEILGVMESSSRY FHWKLGLYSILFVLIAVLPFYIGYFIIGNIRLVPQKRHWRAGLTAAVWFVFLYLFWKVGDPFPILSPKHGIFSIEQCIGR IGVLGVTLMAVLSGFGAVNYPYTSMFYFIRAVSDADIQGVEKRLMQTMDMIIMKKKRVALAKRESLKQASINQSQGGIWG IFKNVRLAAPSTENIPLLKQETDAYEELSRQLFLESVDLHNAQERIAYSKTFKGKYFNFLGYFFSIYCVWKIFISTVNII FDRVGKVDPVTRGIEIAVNYLGIQFDVLFWSQQISFYLIGIIIITSVRGLLLTLAKGMYFVSSVLLMRMNMPQEYRMIIT EVLGELQFNFYHRWFDVIFLISALSSIGFLYIAHKHPQEKSVTGY |
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