Gene
| Gene Model ID | pfu_aug1.0_1276.1_36906 |
|---|---|
| Locus | scaffold1276.1 : 53976 ... 61921 : + |
| To GenomeBrowser | scaffold1276.1:53976..61921 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_593.1_10964 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36906.t1 | 1 | 1 | APOBEC_N | 124 | 228 | 6.4e-06 | 25.9 | 5.4e-10 | 8.1e-06 | 25.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36906.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36906.t1 atgactgagacagttattcacacagctgttacaaacttatctgtattcgtttccgttttcggatcaacccaaccatttct ttgtatgagtccgcgcatcaattcaattattgagggatctaacatacatatgcacggattctggcacaagcggcacttcc atccgaaaccaagtaatggaaatgacgtaagactgtcatgtgacgatgaacacctcttccggcgtgagttttacgttttt tggaattctgggatgccaaacctccgacagcttccagacgaaactgcggccgtatgccatgcgagtttagacgatggaaa tgtggttctaacacgagttttccacggctgtgaacacgatgttcatagagcagaagacaaagttctgaactggttacacc atgaaaactacgtcaaatcctgtaaaaatatgtttttaaccattataatggattcatctccgttatatacattttcaaga aacttaatggagtttaaattgcttcttgacgaacaagagatacttaatgaggtggatctaaaatttgtcagattgtgtca tatggaagatttggaggaggatcgtgaagaaaacaaagagggaatgagactgcttcacaaagcaggtgtgaaattgtcgt cactgacagaaaaggactggtcctttctaagggagcatttattggatccaaatggattgtacgagcaggaaaaaaatgcg cgtcgcgtaactcatgaattggaagagattttgaagaaatga |
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Protein
| Protein ID | pfu_aug1.0_1276.1_36906.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36906.t1 MTETVIHTAVTNLSVFVSVFGSTQPFLCMSPRINSIIEGSNIHMHGFWHKRHFHPKPSNGNDVRLSCDDEHLFRREFYVF WNSGMPNLRQLPDETAAVCHASLDDGNVVLTRVFHGCEHDVHRAEDKVLNWLHHENYVKSCKNMFLTIIMDSSPLYTFSR NLMEFKLLLDEQEILNEVDLKFVRLCHMEDLEEDREENKEGMRLLHKAGVKLSSLTEKDWSFLREHLLDPNGLYEQEKNA RRVTHELEEILKK |
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