Gene
| Gene Model ID | pfu_aug1.0_1276.1_36910 |
|---|---|
| Locus | scaffold1276.1 : 91726 ... 94648 : + |
| To GenomeBrowser | scaffold1276.1:91726..94648 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_593.1_10966 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36910.t1 | 1 | 1 | zf-LITAF-like | 152 | 224 | 3.4e-23 | 81.2 | 3.0e-26 | 5.5e-23 | 80.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1276.1_36910.t1 | gi|282153489|gb|ADA77533.1| | lipopolysaccharide-induced TNF-alpha factor [Meretrix meretrix] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36910.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36910.t1 atgtcaaatgaacctccgagttaccaagaatgtgtacaggggtccttagctccttctatgcctgtcggagccccggagaa ggtacctcaacacggggcaacgtgggacggatctcctcagtatcagtctccgccaccacctcctattggaactaacatga cggccgatccttatgattaccctgttcaaatacatgtagatgaaaaatcaggagcgactccacacattttcacgcagttt cctgaaggtccctcttcaccatatccacctgaaccaacgcatacatacccagttcagatatctggatatgctgcgtcaac atcagtgaactacggactgacgcctggatttacacctgtatccctatctcacggaaataacgacgttaccatgcctggcg attcaacaagtgtcattgtatcaacccaaccacaggccgtaccgattgtattccaagaatttcccgtcagaatgcaatgt ccttactgtaacaaagaaatcacaacagaaacaaaaaatgtggccggaagtgcgtcatggctctggtgttttattctggc tttcttcgggtgtttcctcggatgttgcctgattccatttttgataccgtcttgcttggatgtggagcacacatgcccgg aatgtggggaatcaataggcacgtgctacaggtcgtcacctgttgtcactggtggatcacgtggtcactttagacataca cacagacacaggcacatgcattatggacatgttcatcgcaacatgcacatgcagcatcgtcatcgtcaccgtcagcgtcg tcgtcgtcgtcgccgccgataa |
|
Protein
| Protein ID | pfu_aug1.0_1276.1_36910.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36910.t1 MSNEPPSYQECVQGSLAPSMPVGAPEKVPQHGATWDGSPQYQSPPPPPIGTNMTADPYDYPVQIHVDEKSGATPHIFTQF PEGPSSPYPPEPTHTYPVQISGYAASTSVNYGLTPGFTPVSLSHGNNDVTMPGDSTSVIVSTQPQAVPIVFQEFPVRMQC PYCNKEITTETKNVAGSASWLWCFILAFFGCFLGCCLIPFLIPSCLDVEHTCPECGESIGTCYRSSPVVTGGSRGHFRHT HRHRHMHYGHVHRNMHMQHRHRHRQRRRRRRRR |
|