Gene
| Gene Model ID | pfu_aug1.0_1276.1_36915 |
|---|---|
| Locus | scaffold1276.1 : 135866 ... 151385 : + |
| To GenomeBrowser | scaffold1276.1:135866..151385 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_4823.1_12712 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36915.t1 | 1 | 1 | DNA_pol_B_2 | 656 | 1216 | 2.2e-31 | 109.0 | 9.4e-35 | 1.4e-30 | 106.4 |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36915.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36915.t1 atgggtgaactagctctagtgaattcgtttgacgattacacacaacttaaacattttgcgtttcagtatggtttaagcga tgatccacaagttctgaatagattgcaatttttgttggatagaaatgtatcattaatggccaccgagatcgacgagttcc aagaaatgtgtaacttttcctactgtaacaatcaggatgcgggtccctcaaaaaaatgtagtaagcttgaattatcacca acaagtttaaaaacaaaacagactggaggtagtgctgatgaaaaaccttattacattgaacaaagtagtaaaagaacttt caagtcaacgttagcaacagacacttctttcaaagtaaagtttaatgaacgatggcaagggaaaaagttaaacgatatcc taagtggacttcatgaaatgtttgatgatattatttctaaagctagaggacacgaagccgaccttggacgtgtggtaatc caacatccggatttatctaatccagttgtagtacctttacaaccatgggaaaagcttgattcagacactgtgatggatga aatatctaaagttctgaattcagaggaaaatctccatattgatgagaatatggttgtgacagttggttccataagtttac ctaaaggtggtgccaaacaatcaataacccagttattcggtcacggaaattctatacagaaaaaacgttctctattctat gtagaaaacgataacaatatatgtctagcaatagctgtagggctatgctatttgaagatttgtgagagggtgagcattga tcaatttgataatctcgctgaaaacgacaatgaatctagatttgataagattttgaaacataaaaaaatttcaaaatgct tttatgacaaacttatggataggaaacgtccaaagttacgttcagagttaggtctacgtctatgtcaacttgcggaatta ccaacaacaaggtatttaggtttaagtgatattccagcctttgagcaactcttaaacctaaacatcttcgttgtgtcttc aaaagttggtgacaaatttgtacgcatttttgagaatgacgataggcccaatctgtttttgtatcacattgaaaatgaaa cagagaaacactggcatgggatagcgaatattcaaggattttttaaaggaaaacatttttgtaaaagttgcaaccaacct tttaactcaaagcataaacattcttgtgagacatcgtgtactgtatgtcttgattctgaatgtcgtgtgcagaaagatgc gtctatgtgtagcagttgtgggcgtctttgtcgttcaatggcatgctataaccgacacaaaagacaaagaacaaaaggta aaattacatatccctcacaatgtgaactgtattatcagtgcgagagttgtaaaaaaatcattaaaaggggggaaagaaat cccgaggatcatgagtgtggagaatggaagtgtccttcctgtcagatgtattacgtaggacaacatttttgtttccaaag gagtcaacccatgcccgatcctgaaaagtccaggaagaaatttattttctatgactttgaaacacgacaagatgcacaaa tgacttgtgacgagggttattctccctctaaaatccgatgtcgaaaatgtgtgggcaattctgccccatgtaaatcatgt aaactttgtcgtaattgcagagaaaacacttgtggattagcacaacaccgtgttaattttgccgtaatgcaaacctcttg tgatctgtgtcaaaatgaagaactgacaccaaactccaaatgttctaattgtggaagaagatgtggcttttgtggtgtta aagataagaaaacaaaagaatttcaacgtgacccgtgttcggggacctgtggacatagagagacagtgtttcaaggcgag gatgcaatctttaaattttgcaattatatcacacaggaacacattgcaaattatgttcttattgcccacaatgcaaaaag ttttgatttataccccattttggaaaccctcattgagcgacatgcgatcaaacccaataagatcatttacaatgggagca aaattatgtacatgcatattgcaaataagttgaacttgacattcgtcgactctttaaatttcatcccaatgccactcgct aaattgccagacgcatttgagttagaagaattatgtaaagggtttttccctcacaaatttaatactttgttgaatcagaa ttatatcggaaaatacccccatccggatgattacggttacaacactatgtccagtgaaaggagaaaggaattccttagat ggtacaacgaaaaagaaaatgaaacgtttgactttcaatctgaaatgttaaaatattgccgttccgatgtagatatcttg agacgggggtgcttaaagttccgtgctttattaaaagaagtcactgttggaattgatccttttgattatgtaactatagc tagcgtttgcatgggtatattcaaaactcttttcttaaaagaggaacgagaaagagaaattacagatatagtcaacgaca aatctaagtgggtggcacaaaaaatggaaaatgaccaggaatatttactttttaatgacacgtggatatcagttnatctt tttttttcaattcaagctttattttgtttgaggtgtgcttttcatggctgtccgacgtgttttccgaacaacagaattga aatacatcatcctaccacgaaacaatctctggaggaattgtatattataaccatgaaaagagaggcggagttgcgttcta ggggtttcaaattaataacaaaatgggaacacaaattccaagcagatatcaagagacattctgatttacaccaatatatc gaacatttggacatacaggatcgtctgaagcctcgagacagcttttttggtggacgcacaaacgctacaaagctttatca caaagcccaagatggtgagagtattcaatatttcgacttcaccagtctatatccttacacaaataaatacatgaggtacc ctataggacatcctaaaatcattgtagataattttacagatatcacagactactttggaattgccaaagtaaagatttta ccaccaagaggactttatcatcctgtgcttccctacacttcgaatgggaagcttaaatttcctttatgtcgaacttgcgc cgacgaggaaaatcaaacagaatgtaaatgttcaattgaagatcgatgtgttgtaggcacatggtgtactcctgaaattc aactagctgtgaaaaagggatatacaattttgaaaatatatgaaatatatcacttcgaagaatcaacccagtatgatcca accacaagtgaaaagggtcttttcagcgattatgtcaatatgtttttgaaaattaaacaagaagcatcgggtttcccaga tgaatgtgatacagaggaacaaaaacgagagtacataagacagtataaaatcaaagaagggatcgaacttgagtataaca aaattaaagtcaacaagggtctgcggagcctggcaaaactctgtctaaatagtttctggggaaaatacggtcaaaggtta tcagtcaagcaatctcgattccttcatgaatcggaagttgaaaatatgttcaaactattgaccgatccgaggaaagatgt tcacaattttcatatcataacgaaggatatgatacagttagaatggtctgatgatcctgtgtttctgccttttgacacta aaacgaatatattcttagcctccttcacaactatgtgggccagactccgtctgtatgaggttttagacattctagacaga gatgtgttgtactttgacacagatagcgttatttttcgttgtaccggcaaaagtactttgcaaaaattaccaataggaaa ttatttaggagaactcacaaatgaaattaaacccaaagatggtcatataattgaatttgtgtcaggaggacctaaaaact atgcatacaaaacaaaatctgggaaagaacattgcaaaatacgaggtttcacaatgaactgggaaaattcaaaattgata aattttgaagctgtgaaaaccatggtatgcactagagatttaaaaacaatagaaacaacaaaccagtgtaagatttcgcg tcatgccttgaaaaggaagctttacaatcgtgttgaacacaaaaaatacaaaattgtttacacaaagagacgtttattag acgatcttgacacagtgccttacggtttctga |
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Protein
| Protein ID | pfu_aug1.0_1276.1_36915.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36915.t1 MGELALVNSFDDYTQLKHFAFQYGLSDDPQVLNRLQFLLDRNVSLMATEIDEFQEMCNFSYCNNQDAGPSKKCSKLELSP TSLKTKQTGGSADEKPYYIEQSSKRTFKSTLATDTSFKVKFNERWQGKKLNDILSGLHEMFDDIISKARGHEADLGRVVI QHPDLSNPVVVPLQPWEKLDSDTVMDEISKVLNSEENLHIDENMVVTVGSISLPKGGAKQSITQLFGHGNSIQKKRSLFY VENDNNICLAIAVGLCYLKICERVSIDQFDNLAENDNESRFDKILKHKKISKCFYDKLMDRKRPKLRSELGLRLCQLAEL PTTRYLGLSDIPAFEQLLNLNIFVVSSKVGDKFVRIFENDDRPNLFLYHIENETEKHWHGIANIQGFFKGKHFCKSCNQP FNSKHKHSCETSCTVCLDSECRVQKDASMCSSCGRLCRSMACYNRHKRQRTKGKITYPSQCELYYQCESCKKIIKRGERN PEDHECGEWKCPSCQMYYVGQHFCFQRSQPMPDPEKSRKKFIFYDFETRQDAQMTCDEGYSPSKIRCRKCVGNSAPCKSC KLCRNCRENTCGLAQHRVNFAVMQTSCDLCQNEELTPNSKCSNCGRRCGFCGVKDKKTKEFQRDPCSGTCGHRETVFQGE DAIFKFCNYITQEHIANYVLIAHNAKSFDLYPILETLIERHAIKPNKIIYNGSKIMYMHIANKLNLTFVDSLNFIPMPLA KLPDAFELEELCKGFFPHKFNTLLNQNYIGKYPHPDDYGYNTMSSERRKEFLRWYNEKENETFDFQSEMLKYCRSDVDIL RRGCLKFRALLKEVTVGIDPFDYVTIASVCMGIFKTLFLKEEREREITDIVNDKSKWVAQKMENDQEYLLFNDTWISVXL FFSIQALFCLRCAFHGCPTCFPNNRIEIHHPTTKQSLEELYIITMKREAELRSRGFKLITKWEHKFQADIKRHSDLHQYI EHLDIQDRLKPRDSFFGGRTNATKLYHKAQDGESIQYFDFTSLYPYTNKYMRYPIGHPKIIVDNFTDITDYFGIAKVKIL PPRGLYHPVLPYTSNGKLKFPLCRTCADEENQTECKCSIEDRCVVGTWCTPEIQLAVKKGYTILKIYEIYHFEESTQYDP TTSEKGLFSDYVNMFLKIKQEASGFPDECDTEEQKREYIRQYKIKEGIELEYNKIKVNKGLRSLAKLCLNSFWGKYGQRL SVKQSRFLHESEVENMFKLLTDPRKDVHNFHIITKDMIQLEWSDDPVFLPFDTKTNIFLASFTTMWARLRLYEVLDILDR DVLYFDTDSVIFRCTGKSTLQKLPIGNYLGELTNEIKPKDGHIIEFVSGGPKNYAYKTKSGKEHCKIRGFTMNWENSKLI NFEAVKTMVCTRDLKTIETTNQCKISRHALKRKLYNRVEHKKYKIVYTKRRLLDDLDTVPYGF |
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