Gene
| Gene Model ID | pfu_aug1.0_1276.1_36920 |
|---|---|
| Locus | scaffold1276.1 : 195300 ... 216115 : - |
| To GenomeBrowser | scaffold1276.1:195300..216115 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_2561.1_05576 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36920.t1 | 2 | 1 | F5_F8_type_C | 47 | 144 | 1.6e-08 | 34.4 | 1.8e-09 | 1.3e-05 | 24.9 |
| pfu_aug1.0_1276.1_36920.t1 | 2 | 2 | F5_F8_type_C | 340 | 394 | 1.6e-08 | 34.4 | 0.0009 | 6.7 | 6.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36920.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36920.t1 atggatactttaatatatatttccttctttgtaatttgtttcctaggttgtacagtaacgggatttgataatttggcacg aaatagatcagtgtatgccatttttcctcttctgcgctctggctcgctgtctgacgtcacggatggtgccgaacaaacct gtattataacattttcaacggaagagaataaagcctttataaggattgacttaggacaagtgtatacaataagaaatgtc agctttgtatttcgtcaagaccacatccaccgtatcacaccgttcaggatttatctatccagtcagttcctgtcaccaga gagtaatttatgttatcgttatacggacaccacccagcttcccccacagccgggtaccttcccctgcccggctactgggc ggtatctctccataacgagtactagagatgacgatataccttcagcatggagacccgacgaggaatttgctacgatgtcg ttctgtgacatttctgttgaaggttgccgacagtacggaagatttggagaaaactgcaataggacatgttattgtcggac gtacacgtgtgattacgtcacgggggcgtgtccgaataatgaatgtgccgatggctggcaaggtccaacttgcagtgatc gaatcgataccagtagttccacagggtcatcgtccggaaacggaaaccaacaacaaagactattattaggagcggagtcg gttggaacagtaactgttgtttttaatgcccctgatcagtgtttattcaagtgcgtatacgtattcacgggcaggaacac gttacgtcgccttacagtaccgttgtcagaagtatttaaagttctgcacttaaaaccgtccgttgacattatgccacaga atgtgatgggacatttacaatttattttcgcgtcgtttttatttttcttcgccagatgccatggatacgataacttgctt caaggacagatttcatacgacttcttcccgtctatttactccggaactttgaatgacgtcacagatgaaaacagcggcac gtgtctcgttactcaaaccacaagcagcactgcttacctccggtttaacatgagtgaagtttacagcataaaagagctga gatattctttcagacgattacatatccatcgaatgaccccgataaatatatctctgtccaacacttctactggagctggt cagtcgtgcttccagtatgctgacttttctggacttcctccggaatccggaaacttctcctgtgttgggaccggacagta cttatttattacaattcatagaggatccggacttccggctcagtggcgaccagacgaaccggtagcttccgtttcttttt gtgaagtttctgtaccgggatgcagggtctatggaagatatggtccgaattgtaatcaaacatgtaattgtagaactttt acatgtgattatgaaactgggcagtgtccgaacggggagtgtgcagctggatggactgggcaaacctgtaatattagtac tacatcgactaccaaatcgtcgcccacgtcgcctccgtctagctctactgctcatgtcagtgtatcaactttatcttctg cagtgtcttcatccagtgccaaaacatctacttcttcaacacaatccacaactgcttcgacaacgacatctgtcggcgga gtaactgcacctctaagtgacacattcacactaacctccgatggaattggaccggggttgattgccgctgtggctatggt cgccatgtcatttatcatcgttataggccttatcatcgtcgtcggacgaagtttacgaagtggacgacatggcaaatga |
|
Protein
| Protein ID | pfu_aug1.0_1276.1_36920.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36920.t1 MDTLIYISFFVICFLGCTVTGFDNLARNRSVYAIFPLLRSGSLSDVTDGAEQTCIITFSTEENKAFIRIDLGQVYTIRNV SFVFRQDHIHRITPFRIYLSSQFLSPESNLCYRYTDTTQLPPQPGTFPCPATGRYLSITSTRDDDIPSAWRPDEEFATMS FCDISVEGCRQYGRFGENCNRTCYCRTYTCDYVTGACPNNECADGWQGPTCSDRIDTSSSTGSSSGNGNQQQRLLLGAES VGTVTVVFNAPDQCLFKCVYVFTGRNTLRRLTVPLSEVFKVLHLKPSVDIMPQNVMGHLQFIFASFLFFFARCHGYDNLL QGQISYDFFPSIYSGTLNDVTDENSGTCLVTQTTSSTAYLRFNMSEVYSIKELRYSFRRLHIHRMTPINISLSNTSTGAG QSCFQYADFSGLPPESGNFSCVGTGQYLFITIHRGSGLPAQWRPDEPVASVSFCEVSVPGCRVYGRYGPNCNQTCNCRTF TCDYETGQCPNGECAAGWTGQTCNISTTSTTKSSPTSPPSSSTAHVSVSTLSSAVSSSSAKTSTSSTQSTTASTTTSVGG VTAPLSDTFTLTSDGIGPGLIAAVAMVAMSFIIVIGLIIVVGRSLRSGRHGK |
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