Gene
| Gene Model ID | pfu_aug1.0_1276.1_36922 |
|---|---|
| Locus | scaffold1276.1 : 224001 ... 234665 : - |
| To GenomeBrowser | scaffold1276.1:224001..234665 |
| Genes list of scaffold | scaffold1276.1 |
| Synonym | pfu_aug2.0_2561.1_05577 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1276.1_36922.t1 | 3 | 1 | SOCS_box | 116 | 125 | 1.7e-06 | 27.7 | 0.39 | 5700.0 | -2.8 |
| pfu_aug1.0_1276.1_36922.t1 | 3 | 2 | SOCS_box | 157 | 168 | 1.7e-06 | 27.7 | 0.019 | 280.0 | 1.4 |
| pfu_aug1.0_1276.1_36922.t1 | 3 | 3 | SOCS_box | 262 | 294 | 1.7e-06 | 27.7 | 1.4e-09 | 2.1e-05 | 24.2 |
Transcript
| Transcript ID | pfu_aug1.0_1276.1_36922.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36922.t1 gtacaatcagttacatacagcaaatggatcaaacattacaaagacatttctggtttcaacgactttgcggatttttctac ttgtcgagagtccagactgcgccatggcattttagtaaaaccagacacaactaacggctcctacatcattcccagtctta agataaggtctgaacttcaattgattgagaaacaaggctgatggtacgagtgctacatatcaccaaataaaaatgttata ctattacgtccagacaatttgaccaggattgtaagtcttccagataactgcctcttagaaaatgttaccatggaaacaga tgatgtcaatattaatgtacaggttatacctccgacccttcgtagccatgttttgacttttaaccgacatttaggggatc actctgtacttgttgcttttcatactaatatcgatgtgaaacaaatagcaacatgggaaacagttcgaagtgttcagaat ttagatctcccggcatccattcagcagatcaagtccagtccttctggtgattttatagcagtgagatgtgtgcagcctgt tcatagcaaggaatataatgtcaacatggtggcagttttgagcttccatacttttaacattttgtttaaggtggatgcaa gaggatgctattggcctgtctcagaggttgtcaacctgcaagtcttcccacatttctctccgagtgaatcgagtatcgca ataatgaagaacggaacctacaaccgcaaggtcatgacctacaaacttccaatagcccagctaaatttacagtgcctatg tcgtcgaaccctcctgcagtatgtgagctacagagatgtgagaaaacttccattaccgtcaagaattcagaacatattac ttgggaagccaggttgtttgaatgatcataaagcttga |
|
Protein
| Protein ID | pfu_aug1.0_1276.1_36922.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1276.1_36922.t1 VQSVTYSKWIKHYKDISGFNDFADFSTCRESRLRHGILVKPDTTNGSYIIPSLKIRSELQLIEKQGXWYECYISPNKNVI LLRPDNLTRIVSLPDNCLLENVTMETDDVNINVQVIPPTLRSHVLTFNRHLGDHSVLVAFHTNIDVKQIATWETVRSVQN LDLPASIQQIKSSPSGDFIAVRCVQPVHSKEYNVNMVAVLSFHTFNILFKVDARGCYWPVSEVVNLQVFPHFSPSESSIA IMKNGTYNRKVMTYKLPIAQLNLQCLCRRTLLQYVSYRDVRKLPLPSRIQNILLGKPGCLNDHKA |
|