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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12766.1_03278
Locus scaffold12766.1 : 2386 ... 14297 : +
To GenomeBrowser scaffold12766.1:2386..14297
Genes list of scaffold scaffold12766.1
Synonym pfu_aug2.0_276.1_20540

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_12766.1_03278.t1 2 1 Sugar_tr 11 121 1.9e-15 56.3 6.3e-09 4.7e-05 22.1
pfu_aug1.0_12766.1_03278.t1 2 1 MFS_1 12 121 2.4e-18 65.9 9.9e-12 7.4e-08 31.4
pfu_aug1.0_12766.1_03278.t1 2 2 Sugar_tr 123 294 1.9e-15 56.3 1.7e-13 1.2e-09 37.2
pfu_aug1.0_12766.1_03278.t1 2 2 MFS_1 152 297 2.4e-18 65.9 3.4e-14 2.5e-10 39.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_12766.1_03278.t1 gi|195573427|ref|XP_002104695.1| GD21083 [Drosophila simulans] 0.0

Transcript
Transcript IDpfu_aug1.0_12766.1_03278.t1
Definition-
>pfu_aug1.0_12766.1_03278.t1
atgtcattaaaacgagttgagcgactttcttgttttggccgtaagaaaaccctgatgttgtctatcctacttctgctctg
tagtagtatgggtgtggcctgggcccctgactacgccacattctgtgtactcagattcttcgttggtttttcctgtgctg
gactcttcatgaccggattcgtcttaggaatggaattgactggtccatctaagagagtatgggcaggagttgtgatagag
tatttcttcgccattggtttggtagtactggccggactggggtacttcatcagacattggaagtacatagaaatagcttg
tgccgcacctactgcattctttttactttactggtgggctgttgtgagcatggtgtactatggattgtccctgaacagtg
gaaatttggcgggagatttctatttgaatttcttcctctccggagttgtggaatttccggcctatactttatgtcttgtt
ttactagatcgtattggtagaaagaagttacatgcgtcatgtatgatattaggaggtttagcatgtgtttccactatatt
cccggtgctgtatctagacaaagagtatcaatgggtgacggtgattttagctatgttgggtaagataggagcggcggcag
cgttcgctgtcatatatgtgtgggcggcggagttgttccccacggtggtacggaacgctgggatgggggctagttcctca
tgtgcccgtgtaggagggatggtgtcaccttacattgcagatctatcaaaagtgatagaaggaggaatgggtcaagcgac
gccccttattatatttggtggattttcagtacttgcaggactcttgtctatttatctaccggaaacacttggtcataatc
ttcctgataccatagaggacggaatcaagtttggagagaaatccagaaaatatcaaactaatgagaaagaagacggtgtt
gaaaataactcctacattgttgaccaaacaaaattttga

Protein
Protein IDpfu_aug1.0_12766.1_03278.t1
Definition-
>pfu_aug1.0_12766.1_03278.t1
MSLKRVERLSCFGRKKTLMLSILLLLCSSMGVAWAPDYATFCVLRFFVGFSCAGLFMTGFVLGMELTGPSKRVWAGVVIE
YFFAIGLVVLAGLGYFIRHWKYIEIACAAPTAFFLLYWWAVVSMVYYGLSLNSGNLAGDFYLNFFLSGVVEFPAYTLCLV
LLDRIGRKKLHASCMILGGLACVSTIFPVLYLDKEYQWVTVILAMLGKIGAAAAFAVIYVWAAELFPTVVRNAGMGASSS
CARVGGMVSPYIADLSKVIEGGMGQATPLIIFGGFSVLAGLLSIYLPETLGHNLPDTIEDGIKFGEKSRKYQTNEKEDGV
ENNSYIVDQTKF

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