Gene
| Gene Model ID | pfu_aug1.0_12766.1_03279 |
|---|---|
| Locus | scaffold12766.1 : 28518 ... 50685 : - |
| To GenomeBrowser | scaffold12766.1:28518..50685 |
| Genes list of scaffold | scaffold12766.1 |
| Synonym | pfu_aug2.0_17084.1_16579 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12766.1_03279.t1 | 4 | 1 | Glyco_hydro_31 | 131 | 225 | 0.0 | 644.3 | 1.7e-15 | 1.2e-11 | 44.0 |
| pfu_aug1.0_12766.1_03279.t1 | 4 | 2 | Glyco_hydro_31 | 257 | 307 | 0.0 | 644.3 | 2.3e-23 | 1.7e-19 | 69.9 |
| pfu_aug1.0_12766.1_03279.t1 | 4 | 3 | Glyco_hydro_31 | 308 | 356 | 0.0 | 644.3 | 4.9e-08 | 0.00036 | 19.4 |
| pfu_aug1.0_12766.1_03279.t1 | 1 | 1 | Trefoil | 496 | 536 | 7.0e-08 | 31.9 | 1.9e-11 | 1.4e-07 | 31.0 |
| pfu_aug1.0_12766.1_03279.t1 | 4 | 4 | Glyco_hydro_31 | 934 | 1428 | 0.0 | 644.3 | 0.0 | 0.0 | 519.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12766.1_03279.t1 | gi|115676777|ref|XP_797271.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12766.1_03279.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12766.1_03279.t1 atgtatagaaaaaaactgtatgaaaattaccaaaatgttatttgttacatcattttacagctgtacgacgaaggaacaca aagatacgaggtaccgatggcgttagatctaccggaagtgacatcagcagacgaccaggaacagtatcagtttgaggtgt acgacaaaactaacttcgccttcaggattaagcgaagaaatactggagttatactttttgatactggggttggaggatta actttgactgacaagtttctgcaacttgcaactcaactaccatccaaaaatgtgtatggattcggagagaatgtacattt cagctttcgtcatgatctgaattacaaaacatggccaatgttcggtcgagaccagcctacttccatgagggatccgtttt tcatcagcaataatacaaattacgagccttacgagatgataaagaacgtcagtggggctgtgatgtggggagatgggtac ggtgacgacagcaatactgaccccacgggggccttactgggatggatctggcccaatgggaaatcagtgtttccggactt cttcaacaataagacgaaaatagtgtggaaagaacttataaagaaacacatcaaaagaatcaattttgacgctctttgga ttgatatgaatgaacccgccagttttgacacaaacaaggagagggcgtggaactggccggtgaatgacaagccatactgg aatctgatttgtcctcacaacgaatgggacgatcccccttacaggacaagaatgctagagtttagtttgttcgggatacc atacattggagcagatatttgcggcttcatgttggatacaacggaggagctatgtacacgatggatgcagctgggagctt tctatcccttctcccgtaaccataacggaattaatgtcgctgggcaagatgctttacactactatcttcctcgcggcatt tggtacgatttctacaccaatgccgttactcatggtcctagcaatcagagtatgtcggttaccatggatacaccactaca actgcatgtaagaggaggaagtatcctgacactccaagaacccgccctcaatacgacgtacagccgaagaaatccaatga agatccgagtatttctggataaggccgacacggagggtggaaccgctaaaggggacttattctgggatgacggtgaatct atagatacgtatgaaaacggcaattatttcttgggatctttaaaagctgtgcggaatatgtttcggtatgacgtagaggg aaaacgtgagcttacagggggtattacaatcagctctgtagaaataaacggcgtcaacacgaacgtcagttcttatttct ttgaaggaaaaccactccaagacgtcgactgggagtacaatgctgataaaaagatactgatgttcaaaaacttgagcttt cctttaggcgaaccattcgttgtccattggtattcagcagatctttcgagaatagattgttatccagagcgtctgggcgg ggtagacttggtgaccgaggagaagtgtgacagaaggaaatgtatctacgatcctacggaatctgaagatccggattgtt tctttcctaaatcagactatggatacaaagttgacgatgttactacggagccagacggcaccggactgattgccaacttg acatggctggggaaatctccgtttggaaatccaatagaaaatattgcttttaaagtgcaataccatggggatgatgtttt aagattcactctggacgcaagaaaccaatcagaccgatataaagttcctattgacattgaccttcctaccaaagccagac cccgaagtcctcgttaccaagtaacagtcaacccggatcacggtgatagtcccttcaacttcagaataacaaggagaagc tctggagctgttttatgggatacttctgttggtggtcttactttcgaggaccagtttctgcaaatagcaactaaactacc atcctcaaatatttacggatttggagagaacgtacatgctaaatttcgtcataatctacgctggaagcaatggcccatgt tctccagagacgaacctacaggagatcagaatgctagaaaccattatggtgttcacccgttttatacctgtgtagaggat gacggacaatctcatggagtacttctcctgaatagtaacgcgcaagtagaccttgaatggaagaatatatcaacaatgtt tgaaggtgatttacaaaaactgaaactggaaatccgtgaattatcagataatattcttcaggtaaagttcttacatccga caataaacaggtatgaggtacccgtgtcattaaatacagttagtgactcaaacaatggcagaaaatataattttacgtat ttcaacgatgcgaacgacatgtttgttttaaaagtatcacgtatggacacaggaaaagtaatattagacacatccattgg cggtcttacatttgctgatcagttcttgcagcttgttacaaaacttccgtcaaaaaatttgtatggcataggggaaaatc gacactttacatttcgacatgatatgaatttcaaacgttggcctatgttctctcgggacaatggagttaattggggtgac tatgccaatctttatggggttcatccattttacatgtgtgttgaagacgaaatgggaaatgctcatgctgtactccttct caacagcaatgctatggaaattctactccagccctctccggcgctgacttatagaactgttggtggagttttagatttct atttatttcttggccccacgccagaggaggtgatacaacaatatacagaactcataggtcgcccttacttcccgccttat tgggcacttggcttccagctcagcagatatggatataacaacatcaacaacatgatggctgcagtcaatagaacattaga tgccggtattccgtacgacgttcagtatgcagatatagatcacatgaacgaacgaaaagattttactgttgacagcatca attttcccggattcaaagagtatgtagaaaaattgcatgactcaaacatacgcttcataattatattggatccagcacta atctccaatgaaacggattattatccctacgacgaaggattaaaaagagatgttttcgttaaatggccaaataaaacaat aaacccggattattctgaatataatagaagtgatatgttaggttatgtatggcctaaagggaaagtagtttttcctgatt tcttcaaaaacgaaactcgagaatattggattgatcttatcaccaaacatcataataacgtaagatttgatgggttatgg attgacatgaacgaaccggcaaacttcggaacgaatgaaaatagagcatttaattggccagaggatgcagagccatattg gactttgaaatgccctgcttcaaaattagatgatccaccgtataaaccaagaggtatctatggtccacgtttatctgata aaacattgtgcatgattggtaaacagggagatggtaaatataaccattatgatgtacatagcttgtatggatggagtgaa actgaaccaacactggttggattacgtcatgctacaggtaaacgaggtattgtcatatcaagatcaacatacccatcaag tggtacacatacaggtcactggctcggagataacgatagcggctggagggacatgcacgactcagttataggtatcatgg aatttaatctctttggaatcccatacattggtgccgatatctgtggattcttcggggattcagaacctgagctttgtgaa cgatggatgcagttgggcgccttttacacattttctcgaaatcataacacacttggtacaaaagatcaagacccggccat ttttgggtctgccattgcggactcgtcaagaagaatacttgaaattcgctacacgcttcttccgtatctgtataccttat tctatcatgcccacttccaaggaagcacagttataagatccatggttcagaatttcccggacgacaaaaacacctggaat atcgatactcaattcatgtggggttcagaacttcttataattcctgttttgaaagaaggagaacaggaggtcttagggta tttccccttgggacgctggtttgattacagatcaggtaaagaagtaatgggtaccaagagacaccacattttgtcagcac cacgtgactacataccgttgtttgtgagaggcggaagtatacttcctcagcaggaacatggggtgaatactaatcgaagt agaacgaatccgtttggcctgcttattgcacttgatgcaaataagaatgcaacaggaaatttgttctgggatgacgggga atcgatagaaacagttggtaataatatgtattttttcagcgaattccaatttacaaacaacataatcgatatcaaagtaa aacacaacaacacatttgctgtggaaggacttcttttgaattacattacggtttacggcatggacaaaaaaccgctaaaa gtgcaaatttctgtgccatctaaaggaaatgcagcgttccaatttgacatcaatagcaaagtactcaatatcacagacat tgacattccgatttcaaatcaaatggctatttccatatcatag |
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Protein
| Protein ID | pfu_aug1.0_12766.1_03279.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12766.1_03279.t1 MYRKKLYENYQNVICYIILQLYDEGTQRYEVPMALDLPEVTSADDQEQYQFEVYDKTNFAFRIKRRNTGVILFDTGVGGL TLTDKFLQLATQLPSKNVYGFGENVHFSFRHDLNYKTWPMFGRDQPTSMRDPFFISNNTNYEPYEMIKNVSGAVMWGDGY GDDSNTDPTGALLGWIWPNGKSVFPDFFNNKTKIVWKELIKKHIKRINFDALWIDMNEPASFDTNKERAWNWPVNDKPYW NLICPHNEWDDPPYRTRMLEFSLFGIPYIGADICGFMLDTTEELCTRWMQLGAFYPFSRNHNGINVAGQDALHYYLPRGI WYDFYTNAVTHGPSNQSMSVTMDTPLQLHVRGGSILTLQEPALNTTYSRRNPMKIRVFLDKADTEGGTAKGDLFWDDGES IDTYENGNYFLGSLKAVRNMFRYDVEGKRELTGGITISSVEINGVNTNVSSYFFEGKPLQDVDWEYNADKKILMFKNLSF PLGEPFVVHWYSADLSRIDCYPERLGGVDLVTEEKCDRRKCIYDPTESEDPDCFFPKSDYGYKVDDVTTEPDGTGLIANL TWLGKSPFGNPIENIAFKVQYHGDDVLRFTLDARNQSDRYKVPIDIDLPTKARPRSPRYQVTVNPDHGDSPFNFRITRRS SGAVLWDTSVGGLTFEDQFLQIATKLPSSNIYGFGENVHAKFRHNLRWKQWPMFSRDEPTGDQNARNHYGVHPFYTCVED DGQSHGVLLLNSNAQVDLEWKNISTMFEGDLQKLKLEIRELSDNILQVKFLHPTINRYEVPVSLNTVSDSNNGRKYNFTY FNDANDMFVLKVSRMDTGKVILDTSIGGLTFADQFLQLVTKLPSKNLYGIGENRHFTFRHDMNFKRWPMFSRDNGVNWGD YANLYGVHPFYMCVEDEMGNAHAVLLLNSNAMEILLQPSPALTYRTVGGVLDFYLFLGPTPEEVIQQYTELIGRPYFPPY WALGFQLSRYGYNNINNMMAAVNRTLDAGIPYDVQYADIDHMNERKDFTVDSINFPGFKEYVEKLHDSNIRFIIILDPAL ISNETDYYPYDEGLKRDVFVKWPNKTINPDYSEYNRSDMLGYVWPKGKVVFPDFFKNETREYWIDLITKHHNNVRFDGLW IDMNEPANFGTNENRAFNWPEDAEPYWTLKCPASKLDDPPYKPRGIYGPRLSDKTLCMIGKQGDGKYNHYDVHSLYGWSE TEPTLVGLRHATGKRGIVISRSTYPSSGTHTGHWLGDNDSGWRDMHDSVIGIMEFNLFGIPYIGADICGFFGDSEPELCE RWMQLGAFYTFSRNHNTLGTKDQDPAIFGSAIADSSRRILEIRYTLLPYLYTLFYHAHFQGSTVIRSMVQNFPDDKNTWN IDTQFMWGSELLIIPVLKEGEQEVLGYFPLGRWFDYRSGKEVMGTKRHHILSAPRDYIPLFVRGGSILPQQEHGVNTNRS RTNPFGLLIALDANKNATGNLFWDDGESIETVGNNMYFFSEFQFTNNIIDIKVKHNNTFAVEGLLLNYITVYGMDKKPLK VQISVPSKGNAAFQFDINSKVLNITDIDIPISNQMAISIS |
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